Pyrus x bretschneideri (Chinese white pear): 103941424
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Entry
103941424 CDS
T03446
Name
(RefSeq) exosome complex component RRP43-like
KO
K12586
exosome complex component RRP43
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103941424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxb03019
]
103941424
Messenger RNA biogenesis [BR:
pxb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
103941424
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
103941424
NCBI-ProteinID:
XP_009349892
LinkDB
All DBs
Position
Unknown
AA seq
299 aa
AA seq
DB search
MGLPDGSGDLLSEMDGDAFRRLFPLQFYESHFVKSTRPDGRSLTEARETSSALGAVASAD
GSALVKIGSTTMLAAIKMEVMTPPTESPDEGCIAIDFHMPPICSPTVRPGRPADAAPVVS
KQLSDTILSSGLINLKELSLISGKAAWMAYLDIYCLDADGALFDAALLSAVAAFSHLQIP
VVSMNDEGKVVVMSEEQGGKEAVNNGKRKLTLSSIPFSLTCILHKKYILADPTAEEESIM
ETLVTVVLDSSGQLVSLYKPGGPVLAYTSAIQDCVALTRQRARELQAILDEAISGMEVD
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggggcttccagatggttctggggatttgctgtccgaaatggacggggatgctttcaga
cgtctatttcctcttcagttttatgagagccattttgttaaatctacacgccctgatggc
aggtcactaaccgaagctagagagacttcttcagcccttggtgcagttgcatccgctgat
gggtcagcattagtaaagattggttcaactacaatgctggctgcaataaaaatggaagtc
atgacccctccaacagagtcaccagatgaaggctgcatagcaattgatttccacatgcct
ccaatttgttctccaactgttaggcctggcaggcctgctgatgcagcaccggttgtgtcg
aagcagctatctgacactattttaagttctggcttgattaatttgaaggagctatcctta
atcagtggaaaagctgcttggatggcctacttagacatatattgtttggatgctgatggt
gctcttttcgatgcagctttgctgtcagcagttgctgccttttctcacttgcagattccg
gtagtttcgatgaatgatgaaggaaaagtagtagttatgtctgaggagcaaggtgggaag
gaggcagtcaataacgggaagaggaaactcacactaagcagtattcctttttcattgacg
tgcatacttcataagaaatacatcttggctgaccctacagcagaggaagagtccatcatg
gaaactcttgtaactgtggttttggattcatccggtcaacttgtgtctctttacaagccc
ggtggaccagttcttgcctatacctcagctatccaggactgtgttgcactgactagacaa
agagcgagggagcttcaggcgattttagatgaagccatctctggtatggaggttgattag
DBGET
integrated database retrieval system
