Pyrus x bretschneideri (Chinese white pear): 103942326
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Entry
103942326 CDS
T03446
Name
(RefSeq) uncharacterized protein LOC103942326
KO
K12830
splicing factor 3B subunit 3
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103942326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pxb03021
]
103942326
03041 Spliceosome [BR:
pxb03041
]
103942326
03036 Chromosome and associated proteins [BR:
pxb03036
]
103942326
Transcription machinery [BR:
pxb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
103942326
Spliceosome [BR:
pxb03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
103942326
Complex B
103942326
Complex C
U2 SnRNP specific factors
103942326
Chromosome and associated proteins [BR:
pxb03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
103942326
TFTC complex
103942326
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
Beta-prop_RSE1_1st
Motif
Other DBs
NCBI-GeneID:
103942326
NCBI-ProteinID:
XP_009350793
LinkDB
All DBs
Position
Unknown
AA seq
895 aa
AA seq
DB search
MAVSEEECSSAKSRSSSSASSSTSSYYLAKCVLRGSVVLQVLYGHIRFPNSYDVVFGKET
SIELVIIGEDGIVQSICEQPVFGTIKDISILPWNDKFCTQNPQMVGKDLLVVISDSGKLS
FLSFCNEMHRFFPVTQVQLSNPGNSRNQLGRMLAIDSSGCFIAASAYENRLAMFSVSLSG
GSDIIDKKILFPPENEQDGSAARVQKNSIQGTIWSMSFISKDPRQSSKGHSPVLAIILNR
RDAVLNELLLLGWNIRDQDIYVISTYVEDGPLAHSIVEVPHSPGFAFMFREGDALLMDLR
DAHNPFCVCRTSPNFLSNVVDEANFVQESSRGCDLSRVLQVDDEGGLFNVAACALLELSD
LDPMCIDGDKYNVNVTYKHVCSWSWELGNVKNPRMIVCADTGEYFMIEIIFGPDGPKVQE
SECLYQGSPSKALLWAEGGFLAALLDMGDGMVLKMENGTLLYTSPIQNIAPVLDMSVVDY
HDEKHDQMFACCGVAPEGSLRIIRSGISVEKLLRTAPIYQGITGTWTLRMKVIDSYHSFL
VLSFVEETRVLSVGLSFTDVTDSVGFQPDVSTLACGIVNDGLLVQIHKNAVRVCLPTKAA
HSEGIPLPSPVFTSWFPENMSISLGAVGHNLIVVSSSNPCFLFILGVRVLSSHQYEIYEM
QHLSLQNELSCVSIPHKCFGQTNNTLPFGLDVSNTFVIGTHKPSVEVLSYVPNEGVTILA
SGMISLTNTLGTAISGCIPQDVRLVLVDRLYVLAGLRNGMLLRFEWPAASAMPLSVLTSH
SLVGRQIYDKLYEKTKDYYPVELQLIATRRIGITPVFLVPLSDSLDGDIVVLSDRPWLLH
TARHSISYTSISFQSSTHVTPVCYVECPKGILFVAENCLHLVRVLSILSCALVGL
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctcagaggaagagtgttcctccgccaagtcccgatcgtcgtcgtcggcctcc
tcctccaccagctcttactacctcgccaagtgcgtcctccgcggaagcgtcgttcttcag
gtcctctacggtcacatccgcttccccaactcttacgacgtcgtcttcggcaaggagact
tcaatagagttggtaataattggggaagatgggattgtacaatctatatgtgagcagcct
gtgtttggtacaattaaagacatttccattctaccctggaatgacaaattctgcacacaa
aacccgcagatggtgggtaaagaccttttggttgttatttctgattctgggaagctctcg
tttctctcgttttgcaatgaaatgcacaggttttttcctgtgacacaagttcaactttct
aatcctggaaattcaaggaatcagcttggaagaatgctagcaatcgattcaagtggctgt
ttcattgctgctagtgcttatgaaaaccgtttggctatgttctctgtttcgttgtctgga
ggcagtgacattattgataagaaaatactatttcccccagaaaatgaacaagatgggagt
gctgccagagtccagaaaaacagtattcagggtactatatggagcatgagctttatttca
aaggatcctaggcaatcaagtaaggggcatagtcctgtacttgccattattctaaatagg
agagatgcagtccttaatgaattgctgttactgggatggaatattagggatcaggatata
tatgttatttctacatacgtagaagatggaccgttagcacatagtattgttgaagttcct
cattcccctggatttgcttttatgtttagggagggtgatgctctcctaatggatcttaga
gatgcacacaaccccttctgtgtctgtagaacaagcccaaatttcttatccaatgtggtt
gatgaggcaaattttgttcaagagtcatctagaggatgtgatctgtctagagtacttcag
gttgatgatgaaggaggtttattcaatgtagctgcttgtgctttactagaactgagcgat
ttagatccaatgtgcatagacggtgataaatacaatgtgaatgtgacttacaaacatgtg
tgttcatggtcttgggaactggggaatgtaaaaaatcctagaatgatcgtttgtgcagat
acaggagaatatttcatgatcgaaattatctttggtcctgatggccccaaggttcaagaa
tctgaatgtctttaccaaggttcaccatccaaggcacttctgtgggctgaaggcgggttt
cttgctgcactactagacatgggggatggaatggtcttgaaaatggaaaatggaacgctt
ctttacacaagccctattcaaaatattgccccagtgttggatatgtcagttgtggattac
catgatgaaaaacatgatcaaatgtttgcctgttgtggagtggcacctgagggatcatta
aggattattagaagtggtatcagtgtggaaaagctattaaggactgcgcctatttatcaa
ggaattactggtacttggacattacgaatgaaagtaattgattcttatcattcctttctt
gtgctgtcatttgtagaggagaccagggtattgtcagttggtttaagctttactgatgtg
acggattctgttggttttcagcctgatgttagtactttggcttgtggtattgtaaatgat
gggttgctggttcagattcacaaaaatgcagttagggtctgtttgcccaccaaggctgcc
cattctgaaggtattccacttccttctcctgttttcacatcttggttcccagaaaatatg
agtatcagtttgggggctgttggccataatctcattgttgtttcttcatctaatccatgc
tttttattcattcttggggtcagagtgctttcgtcacatcagtatgaaatttatgagatg
caacatttgagcttgcaaaatgaattatcatgtgtttctattcctcataaatgttttggg
caaaccaataatactctcccatttggactcgatgtaagtaatacctttgttattggcaca
cacaagccctcagtggaagttttgtcttatgtgcctaatgaaggcgtgacaattcttgct
tctgggatgatctcattaacaaatactttaggaacagctatcagtggctgcattcctcaa
gatgtaaggcttgtattagttgacagattgtatgtccttgcgggattgaggaatggaatg
ctacttcgtttcgaatggcctgctgcctctgcaatgcctctgtctgttttaaccagtcac
agtcttgttggccgacaaatatatgataagttatatgagaagacaaaggactattatcct
gttgagctgcaattgattgccactcgtcgcattggcatcactcctgttttcttggttcct
ttgagtgactcgctagatggtgatatagttgttctcagtgataggccttggttgttacat
actgcaaggcacagtatctcgtacacttctatctcatttcaatcatcaacacatgtcact
cctgtatgttatgtcgaatgccctaagggaattttatttgttgcagagaactgtctacat
ttggtgagagttctatccatattgtcttgtgctcttgttggtctatag
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