Pyrus x bretschneideri (Chinese white pear): 103942417
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Entry
103942417 CDS
T03446
Name
(RefSeq) transcriptional regulatory protein SIN3-like
KO
K11644
paired amphipathic helix protein Sin3a
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pxb03036
]
103942417
Chromosome and associated proteins [BR:
pxb03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
103942417
REST complex
103942417
Heterochromatin formation proteins
Other heterochromatin formation proteins
103942417
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
DUF7556
Motif
Other DBs
NCBI-GeneID:
103942417
NCBI-ProteinID:
XP_009350876
LinkDB
All DBs
Position
Unknown
AA seq
1447 aa
AA seq
DB search
MNSQKSTIHSTDSVNNNEVDKSNHNSQPVANNTYRPQTSQNAAVNALNTAAAIQESSAAK
LINKSAIYNELGDLKKKSFDESVSSQNSATADQTLSRVNTSKSEPDYRSKPKEFINTGAL
NTANNIAAASVEKFKTDIKAVSEGIKPNVDVGNGSVYSQNSQEPKNQATNAQEVEHSHHQ
PINEFSESHNINQFTPLQISTKEMNQRFNKDTSKLEIPQAVNSLESNDHSQLATSGEKDH
EVQQETGSNVDENDNAQRPLNVRDALSYLEEVKLQFFNRPAVYNSFLDIMKDFKAQTIDT
PGVIERVSTLFSEYPLLIQGFNTFLPHGYKIEYSDVPGDPFPVKVITPYSGGAVELNAGV
LHAQQQEAQINQLNERTQENADQEYNDQSGINSNYPQGVSEYSDVNPVKVEDDNVPIYQD
NIPQNHVIEPDVNQDQQSDVEFSHAINYVNKIKTRFKSDPSVYKSFLEILQTYQTDQRPI
HEVYEQVTMLFQGAPDLLDDFKKFLPDTTQEQPHGLQGPPQISTAHHEIELPVSEIQKVQ
QMPPIGSFSPPKQAQVADNILLNEQAQHNLILENGGHLVEAAGNADIPISNLRGQPYNSE
AINELNQQTLNPDYSNHSIGFENNMLGTGQSNVERPEIDLDPSLVPIIPEPLEPAESELE
INDEVHFFEKVKKKIGSKQVYQDFLKLLNIYTQDLISKNDLIRKIAQFIGNDNELFSWFK
MFIGYEELPKEIENIVYEKHRVDLDLCEACGPSYKRLPKADTFMPCSGRDEMCWEVLNDE
WVGHPVWASEESGFIAHRKNQYEETLFKTEEERHEYDFYIEANLRTIQTLEVINNRINAM
TPEEKASFRLPEGLGATSMTIYKKVIRKIYEKDRGLEIIEALHEHPAQTVSVVLNRLKQK
DEEWRRNQREWNKVWRDIEQKVYYKSLDHLGLTFKQTDKKLLLTKQLLSDLSTIKEDPLC
KEFGTNSIVNKRWNPLVLKPSSEIVYEYKDNEILFDIINMCKTFIFKVSSYSQSDKEKLE
IFLYWFVSFFFDIPYSELIENTFDDKFTDDDAKVGDKRSADASLEQISLLDKLEGLNGIL
SVIHKNDGAEATDHASDDSDKSSTTETDENELFKKAILKSWSVDVVSGPVDEEAFDKQER
DRHIFYGNTQIYLLVRVFSILYERLLEVKKIDEEVTRDIKKRSPNGFIDSMFLSSQQIND
RGFGFNGNSAYSELTKHINEFIEGKIDCSWFEESLRQAYKNKAFKLATVDKVVQQIVKQC
NNCTTDKKSQSLLKLFECDRKDSALLLKNQILLRIQSRRVLDNNEMMFSIDYSKKSGRLV
IQYVKTDNVPVSVENNTESEKRWKSYVQSYQMSYSTEGANAAAATDLVHEKIDADEAKED
NVIEKTKLSLEIDRTDYKSNIKQGSTNVFSQKETENSSQKTSVPAEPLINEWINANSAKH
PSAEETH
NT seq
4344 nt
NT seq
+upstream
nt +downstream
nt
atgaactcacaaaaatcaactattcattctaccgattctgtgaataacaatgaagtagac
aaaagtaaccataatagtcagccagtggctaacaacacatacagaccacagactagtcaa
aatgctgctgtaaatgctttgaacactgctgctgcaattcaggaatcttctgctgctaaa
ttgatcaacaaaagtgccatttataatgaattaggagatctaaaaaagaagtcctttgat
gaatctgtttcaagtcaaaacagtgctactgctgatcaaactctttcaagagtcaataca
tctaaaagtgaacctgattatagatcaaagccaaaggaatttattaacacaggtgcttta
aacactgccaacaatattgccgctgcttctgttgaaaaatttaaaacagatattaaagct
gtttcagagggtatcaaacctaatgttgacgttggaaatgggtctgtatattcacaaaac
tcacaagaacctaaaaatcaagcaacgaacgctcaggaagttgagcatagccatcaccaa
ccaattaacgaattttcagaatcccataacattaatcaatttactccgttacagatcagt
actaaagaaatgaatcaaagattcaataaagacacatcaaaattggaaattccacaggcg
gtaaactctttagaaagcaatgatcattctcaattggcaacatctggtgagaaagatcat
gaagtacaacaagagactggttctaacgttgatgaaaatgacaatgcacaaaggccatta
aatgtcagagatgcgctgtcatatttagaggaggtcaagcttcaattttttaatagacct
gctgtttacaattcctttttagacattatgaaggatttcaaggcacaaacaattgataca
cctggcgtcattgaaagagtttccacattgttttcagaatatcctttactaattcaaggc
tttaatacatttttaccccacggatacaaaattgaatatagtgatgttccaggtgaccca
ttccctgttaaggtaattacaccttacagcggtggtgccgtagagttgaacgctggtgtt
ctacatgctcagcaacaagaagctcaaatcaaccaacttaatgagagaacccaagaaaat
gccgatcaagaatataatgaccaatctggaatcaacagcaattacccacaaggtgtctct
gaatattctgatgtaaatcctgttaaggttgaagatgacaacgtgccaatatatcaagac
aacataccacaaaatcacgttattgaacctgatgttaaccaagatcaacaaagtgatgtc
gaatttagtcatgccataaattacgttaacaagataaagacaagattcaaatcagatcct
tctgtctacaaaagctttttagaaatcttacaaacttatcaaacagaccaaagacctata
cacgaagtctatgaacaagttactatgctttttcaaggtgcccctgatttattagatgat
tttaagaagttcttacctgacactactcaagaacaacctcatgggttacaaggtccacca
caaatatcaacagcacatcatgaaatcgagcttcctgtatcagaaatacaaaaagttcaa
cagatgccacctataggaagcttttctcctccaaaacaggcacaagttgccgataacatt
ttgttaaatgagcaagctcagcacaatcttatattggagaacggtggccacttagttgag
gcagcaggaaatgcagatattccaatttctaatctaagaggccagccttataattcggag
gctattaatgagctaaatcaacaaaccttgaaccctgactactctaatcacagcataggt
tttgaaaacaacatgttgggaaccggccaatcaaatgttgaaagacctgaaattgatcta
gatccttcattagttcctattataccggaacctttagaacctgcagaatctgagcttgaa
atcaatgatgaggttcatttctttgaaaaggtaaaaaagaaaataggatcaaagcaagta
tatcaggatttcctaaagcttttaaatatttacactcaagatctgatttccaaaaatgac
ttaatcaggaagatagctcagtttataggaaacgataatgagctattttcttggtttaag
atgtttattggctatgaagagttaccaaaggaaatcgaaaatattgtttatgaaaaacat
agagttgatttagatttatgtgaagcctgtggtccaagttataaaagattacctaaagct
gatacttttatgccgtgttcaggaagagatgaaatgtgttgggaggtgttgaacgatgaa
tgggtcggacatcctgtctgggcaagtgaagagagtgggttcatagctcatagaaaaaat
cagtacgaggaaacactgtttaagactgaagaagagagacatgagtatgatttttacatt
gaagctaatctaagaacaatacaaacattggaagttatcaacaacagaattaatgcgatg
acaccagaagaaaaggcgtctttcagattgccggaaggtcttggtgccacttcaatgact
atctacaaaaaggtcataagaaaaatttacgaaaaagatagaggtttagagattattgaa
gcactccatgaacatccagctcaaactgtatcagttgttttgaatagactaaaacaaaaa
gatgaggagtggagaagaaatcaaagggaatggaataaagtctggagagacattgaacaa
aaagtttactacaagtcgcttgatcatttaggcttgacctttaagcaaacggataaaaaa
ttgttgctaaccaaacagttattgtctgatttatctactataaaagaagatcctttgtgt
aaagaatttgggactaattctatagttaacaaacgctggaatccattggttttaaagcca
agtagtgaaatagtctatgaatacaaagataatgagattttgtttgacataattaatatg
tgcaagacgtttatcttcaaagtttcatcatattctcaatcagataaagagaaattagaa
attttcctatactggtttgtgagttttttctttgatataccttacagcgagctaattgaa
aacacatttgatgataagttcaccgatgatgatgctaaagttggtgacaagcgttctgct
gatgcatctttggaacaaatttctctgttggataagctagagggtcttaacggcattttg
tctgtaattcacaagaatgacggtgccgaagctactgatcatgctagcgatgattctgat
aagagctcaactactgagacagatgagaatgaattatttaagaaggcaatattgaagagc
tggtctgtagatgtggtttctggtccagtggatgaagaggcttttgacaaacaagaaaga
gatagacacatcttttatggtaatactcaaatttatctacttgttagagtattttccatt
ctttatgagagattattagaagttaaaaaaattgatgaagaggttaccagagacatcaaa
aagcgtagccctaatggctttattgattcgatgtttttaagctcccaacagattaacgat
agaggctttggcttcaatggaaactctgcctattctgagttaactaaacacatcaatgag
tttatagaggggaaaatagactgcagttggtttgaagaaagtttgagacaggcttataaa
aacaaagcattcaaattagctacagttgataaagttgttcaacaaatagtcaaacaatgt
aataattgcactactgataaaaaaagtcaatctctgttaaagttatttgaatgtgaccga
aaagactctgcattgttattgaaaaatcaaatcttattgcgcattcaatccagaagagtt
ttggataacaatgaaatgatgttctccattgattatagcaaaaagagtggtaggctggta
atccaatacgttaagacagacaacgttcctgtatcagtagagaataacactgagtcagaa
aaaagatggaaatcttatgttcaaagttatcaaatgtcttactcaaccgaaggagcaaat
gctgcagctgcaactgatcttgttcatgaaaaaattgatgctgatgaagccaaagaggat
aatgtaattgaaaaaactaagttatctcttgagattgatagaactgattataaatcaaac
atcaagcaaggctctacaaatgtattctctcaaaaagaaacggagaactcaagtcagaaa
acatctgtacctgcagaaccgttgattaatgagtggataaatgccaactctgccaaacac
ccatctgctgaagaaacccactag
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