Pyrus x bretschneideri (Chinese white pear): 103943124
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Entry
103943124 CDS
T03446
Name
(RefSeq) protein SHOOT GRAVITROPISM 5
KO
K25871
zinc finger protein IDD14/15/16
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pxb03000
]
103943124
Transcription factors [BR:
pxb03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
103943124
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
C2CH-4th_BIRD-IDD
zf-C2H2
zf-C2H2_6
zf-met
Exop_C
zf-C2H2_4
zf-H2C2_2
Zn_ribbon_4
Motif
Other DBs
NCBI-GeneID:
103943124
NCBI-ProteinID:
XP_009351608
LinkDB
All DBs
Position
Unknown
AA seq
492 aa
AA seq
DB search
MFDNTTTTNNNTAASCSAPPSSSSHENGGATHKRKRRPAGTPDPDAEVVSLSPKTLLESD
RYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKREIAEDQVIKKKVFVCPEPSCLHHDPRH
ALGDLVGIKKHFRRKHSNHKQWVCDKCSKGYAMQSDYKAHLKTCGTRGHSCDCGRVFSRV
ESFIEHQDTCTVRHVVRPELQTALQPAACSSRTASSTSPSSDANFSFSNNVAAPLVMAGL
PVRPNPTHHHDKRAGMNPYISCNRQQQQQQQHQQQHQQEVHNNILELQLLPSSNAHTSSP
PNLDESHATNLKLSIGSPSSDQLANEKNESSKYNSSSDIKRRRSSPGNEKNINNASAVGG
VGSTSELVRLKEFASEELKLAVAEKSYAEDARREAKRQIEMAEIEFANAKRIRQQAQAEV
EKALLLKEQATKRISSAILQITCQACKQHFHIASAASTVAGGAVGRSDETSLAMSYMSSA
TTEGEGDHDHTA
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacaacaccaccaccaccaacaacaacaccgccgcctcttgttccgctcctccg
tcttcttcctctcatgaaaatggcggagccacccacaaacgaaaaagaagacctgcaggc
acaccagatccggatgcagaagtggtgtctctgtcccctaagaccctactcgaatcggac
cggtacgtgtgcgagatctgcaaccagggatttcagagagaccagaatctgcagatgcac
aggcgtcgtcataaggtgccgtggaaactactgaagcgagagatagcggaagatcaggtg
atcaagaagaaggtgtttgtgtgcccggagcccagctgcctccaccacgacccccgccac
gccctaggcgatctcgtcgggatcaaaaaacacttcaggagaaaacacagcaaccacaag
cagtgggtctgcgacaagtgctccaaaggctacgccatgcagtccgattacaaagcacac
ctcaaaacctgcggcaccagaggacattcctgtgactgcggccgtgtcttttccagagtg
gaaagtttcatagagcaccaagacacttgcacagtccgacacgtcgtccggccggaatta
cagacagcgctgcagccggcggcctgctcgtcgcgaactgcatcgagtaccagcccctct
agcgacgccaatttcagctttagtaacaatgtggcagctccactagtaatggctggactc
ccggtgcgaccaaacccaactcaccatcacgataagcgggccggtatgaatccttatatt
tcttgcaaccgtcagcaacagcaacagcagcagcaccaacagcagcaccaacaagaagta
cataataatatattggaacttcagctccttccgtcctcaaacgcccatacttcttccccg
ccaaatttagacgaaagtcacgcaactaatctgaagctctcgattggatcgccgtcaagt
gatcagcttgccaacgaaaagaatgaatcgagcaagtataattcatcgtccgatataaaa
agaagaagaagctctccaggtaatgagaagaacattaacaatgcatctgctgttggagga
gttgggtcgacgtcggaactggtcaggttgaaagagtttgcgagtgaggagttgaaattg
gccgtggctgaaaagtcgtatgccgaagacgcccggcgagaagccaaacggcaaatagag
atggcggagatcgagttcgcgaacgccaagaggatcaggcagcaagcgcaggctgaggtg
gagaaggctctgttgctcaaagagcaggcgactaagagaatcagctccgccattttgcaa
atcacttgtcaagcttgcaaacagcactttcacattgcctctgctgcttccaccgtagca
ggaggagcagtgggacgctctgatgagacctcccttgctatgagttacatgtcctccgcc
acaaccgaaggagaaggagatcatgaccacacagcataa
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