Pyrus x bretschneideri (Chinese white pear): 103943222
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Entry
103943222 CDS
T03446
Name
(RefSeq) cell differentiation protein RCD1 homolog isoform X1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103943222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxb03019
]
103943222
Messenger RNA biogenesis [BR:
pxb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
103943222
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rcd1
DUF2249
Motif
Other DBs
NCBI-GeneID:
103943222
NCBI-ProteinID:
XP_009351736
LinkDB
All DBs
Position
Unknown
AA seq
319 aa
AA seq
DB search
MANRPQSLSLNVPFGGPSVSAPSIAGAQANKDRKMASAERLVLDLSNPDLRENALLELSK
NKELFQDLAPFVWNSFGTIAALIQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHP
DTRMLFLNAHIPLYLYPFLNTSSKARPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEII
PLCLRTMELGSELSKTVATFIVQKILLDDMGLDYICTTAERFFAVGRVLGTMVTALADQP
SSRLLKHIIRCYLRLSDNPRACDALRSCLPDVLREASFNNFLCEDPTTRRWLQQLLQNVG
VSRIPALQGGGGFDHMMVN
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaccggccccagtcactttcattaaatgttccattcggaggtccaagcgtttca
gcaccaagcattgctggagctcaagcaaacaaagatcgtaaaatggcatcagcagagcgc
ttggtgcttgacttgagtaatcctgatcttcgagaaaacgcgcttcttgaactttcaaag
aacaaggaattatttcaagatttggctcctttcgtgtggaattcttttggtactattgct
gcactcatccaggagatagtttcaatataccctgttctatcaccaccaaatctgactccg
gcacaatccaatcgagtttgcaatgctcttgctcttcttcagtgcgtagcttcccaccca
gatacaagaatgttgttcctcaatgctcatatacctttatatctgtatccttttctcaat
acatcaagcaaggcaagaccatttgagtacttaaggcttacgagtttaggagtcattggt
gccctggtgaaggttgatgatactgaagttattagtttccttctgtcaacagaaataatt
ccactgtgccttcgcactatggaattgggcagtgaactctcaaaaacagtagccacattt
atagttcagaagattttgttggatgatatgggcttggactatatttgtactacagcagaa
cggttttttgccgtaggtcgagttttggggaccatggttacagcactggctgatcaaccc
tcatcacgccttttgaaacacatcattcgttgctatcttcgattgtcagataatccaagg
gcttgtgatgctttaagaagttgccttccagatgtgttacgagaggctagctttaacaat
ttcctttgtgaagatccaactactaggaggtggctgcaacaactgctgcaaaatgttgga
gtgagccggattcctgcactgcagggtgggggaggatttgatcacatgatggtgaattga
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