KEGG   Pyrus x bretschneideri (Chinese white pear): 103943244
Entry
103943244         CDS       T03446                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
pxb  Pyrus x bretschneideri (Chinese white pear)
Brite
KEGG Orthology (KO) [BR:pxb00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pxb04812]
    103943244
Cytoskeleton proteins [BR:pxb04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     103943244
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Katanin_con80 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_EML ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_DCAF4 NBCH_WD40 Beta-prop_EIPR1 Beta-prop_Aladin Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_WDR41 WDR90_beta-prop_4th eIF2A Beta-prop_VPS8 Beta-prop_Vps41 Beta-prop_HPS5 WD40_RFWD3 Beta-prop_IP5PC_F Beta-prop_RIG_1st Beta-prop_WDR19_1st Beta-prop_ACSF4 PROPPIN PAN2_N
Other DBs
NCBI-GeneID: 103943244
NCBI-ProteinID: XP_009351770
LinkDB
Position
Unknown
AA seq 803 aa
MTTKRAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNALLSLSGHTS
GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD
FKCHEGQVQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETTGVRSLTFSPDGR
ALLCGLHESLKVFSWEPIRCHDAVEVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISR
IEPYAIGNASRLSGHSESKSLSGGNLSVLNEIAAKSSLGRLSVSQNSDSLVKETKSLGRL
SVSQNSDLVKEPKIIASTGIVPGAPQRINMNSSPKTIVASSVAVPNASTLKRSSTKTHST
ANIPTFNKSDVIPVIVPRTSMRSELSSESRKEVSVAGRPLAFSLQSKATDFRKLSNSREE
VDKPAVSSVSESPASKAIELSSAADKNGFSTVLSSTQGIHAEKNTKDDIYFGPGKHETSS
MMVPTASYQHESYEAPGHKVSREAFSAEGQRGGRLHSIAVNWEKRDRYSNYEGPTSNGTL
GTASAPNIIPLNAFKQRGYPTSTEKETVSASDEDAIADLLEKHDKFVGSMQSRVAKLQVV
YRYWERNDVKGVLGAMEKMADHAVIADVVSIMTQKIDIVTLDICTYLLPLLTGLLESNMD
RHLGISLEMLLKLVRVFGSVIYSAISASSSVGVDIEAEKRLERCNICFVELEKVKCCLPA
LTRRGGSIAKAAQELNLALQEVS
NT seq 2412 nt   +upstreamnt  +downstreamnt
atgactactaaacgcgcttacaagctacaggaatttgtagcacattctgcagctgtgaat
tgcctcaagattggcagaaaatcttctagagttcttgtcaccggcggagaagatcacaag
gtcaatctctgggccattgggaaacccaatgccttactgagtttgtctggacacaccagt
ggaattgattcagtaagctttgattcttcagaggtcttagtagctgcaggagctgcaagt
ggtacaattaagctttgggatttagaggaggcaaagattgttcgcacacttaccggtcac
agatccaattgtatatctgtggattttcatccttttggggagttctttgcatctggctcc
ttagatacaaatctcaaaatatgggatatcaggaagaaggggtgtattcacacatacaaa
ggccatactcgaggggtcaatgctatcagatttaccccagatggacgttgggttgtttct
ggtggagaggacaacactgtgaagttgtgggacctgaccgctggaaagctgctgcatgac
ttcaagtgtcatgagggccaggttcagtgcatagactttcatccccacgagtttctgcta
gcaacaggttcagcagatagaactgtcaaattttgggaccttgaaaccttcgagctaatt
ggctctgctggacctgagacaactggagtgcgttctttgacttttagccctgatgggaga
gccctactctgtggattgcatgaaagtttaaaggttttctcgtgggagccaataaggtgc
catgatgctgtggaggtgggatggtctcgattgtcagatcttaatgttcatgagggaaag
cttcttggatgctcttacaatcagagttgtgttggagtgtgggttgtagacatctcgcgc
attgaaccgtatgcaattggtaatgccagcagattgagtgggcattcagaatctaaatca
ttgtctggtgggaatctctctgtgctcaatgagatcgctgctaaatctagtttgggccgg
ttgtctgtttcacaaaattcagattctttagtgaaggaaacaaaatctcttggaaggtta
tcagtttctcagaattcagatctcgttaaggagccaaaaattattgcatccacaggaatt
gttcctggtgctcctcaaaggatcaatatgaattccagtccaaaaactattgtggctagt
tcagtggcagttcctaatgcatcaaccctgaagaggagttctactaagacccattcaaca
gctaatattccaacttttaacaagtctgatgtcatacctgtaattgtgccaagaactagt
atgaggtcagagctgtcatctgagtctagaaaagaggttagcgttgctggaagaccactg
gcattttctttgcagtcaaaggcaactgatttccggaagttgtccaatagcagagaagaa
gtggataagccagctgtctcttcggtgtctgaatcccctgcttctaaggctattgaatta
agcagtgctgcagataagaatggcttctcaacagttttaagttcaactcagggaatacat
gctgaaaagaacacaaaagatgatatatattttggacctgggaagcatgaaactagttca
atgatggtgccaactgcaagttaccagcatgaaagttatgaggctccagggcacaaggtg
agcagagaagcattttctgctgaaggtcaaagaggagggagattgcactcaattgctgta
aattgggagaaaagagatagatattctaactacgagggacctacttccaatggtaccctg
ggaacagcgtctgcaccaaatattatccctttaaatgcgtttaagcagcgaggttatcct
acatctactgaaaaagaaacagtgtctgctagtgatgaggatgctattgcagatctcctg
gaaaaacacgataaatttgttggctccatgcaatctcgtgttgccaaattacaggtagtc
tatagatattgggaaaggaatgatgttaagggggtccttggtgcaatggagaagatggct
gatcatgctgtcattgcggatgtagtcagcattatgacacaaaaaattgatattgtcaca
ctggatatatgcacttaccttctgccactcctcactggccttctagaaagtaacatggat
aggcatttaggcatttctttggaaatgctgctcaagctggttagagtgtttggttctgtg
atctattcagcaatatctgcgtcgtcatctgttggtgttgatattgaagccgagaaaagg
ctggagcgctgcaacatctgttttgtggagcttgaaaaggtcaaatgctgtttgccggct
ctaaccagaagaggaggatcaattgcaaaggctgcacaggagttgaatttagctcttcag
gaagtttcatga

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