Pyrus x bretschneideri (Chinese white pear): 103943302
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Entry
103943302 CDS
T03446
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb04120
Ubiquitin mediated proteolysis
pxb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103943302
04120 Ubiquitin mediated proteolysis
103943302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pxb04121
]
103943302
Enzymes [BR:
pxb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103943302
Ubiquitin system [BR:
pxb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103943302
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
FlxA
zf-RING_16
zf-RING_5
zf-ANAPC11
zf-RING_11
zf_RING_Vps8
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
103943302
NCBI-ProteinID:
XP_009351843
LinkDB
All DBs
Position
Unknown
AA seq
544 aa
AA seq
DB search
MMKLQTYAGISLVATLAIVYHAFSSRGQFYPAMVYLSTSKISLVLLLNMGLVIMCTMWQL
TKKIFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVSFLAMVTALLLIKALHWLA
QKRVEYIETTPSVPMLSHVRIVSFLGFLLVLDSLFLYSSVSNLIRTQKASVSLFFSFEYM
ILATTTVSTFVKYVFYVTDMLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLAIFTYYG
VPLHLIRELYETFRNFKLRIADYIRYRKLTSNMNDRFPDATPEELNASDAICIICREEMT
TAKKLLCGHLFHVSCLRSWLERQHTCPTCRALVVPPDSGTGTAGGHRGSRSDAHQQGTGT
MAQGGGVAGDSVSQHEARLRAAAAAASIYEKSHVYPSANRLVWSPGYAALPQVQRHTADS
PNTESSGEASSGQSQPQLATPGGAANLSFSQFPPYMFVPGANVAYGGRLSSDPNLTASEL
EAQKKFLQHQIEILQNQLQVLQKPKPKESVDMGPTRPSLDGKGKSVAAPSSVSDCGRHED
RVDT
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagctgcaaacctatgccgggattagtttggtagcaaccctagcgattgtttat
catgcatttagtagtagaggtcagttttacccggcaatggtgtatttgtcgacgtcgaag
atcagcttggtgttgcttctcaacatgggtctggtcattatgtgtactatgtggcaattg
actaaaaagatcttccttggatcactccgggaagccgaggtggagaggcttaacgagcaa
tcatggcgggaagtcatggaaatcctctttgccattactattttcaggcaggacttttcg
gtctcgtttcttgctatggttactgctctgttgttgatcaaggctttgcattggttggct
cagaagagggttgagtacatcgagaccactccttccgtgcccatgctgtctcatgttcgg
attgtctcctttttgggtttcttgcttgttctagatagtctctttttgtacagttctgtt
agcaacttgataaggacacaaaaggcctcggtttccctcttcttttcattcgagtacatg
atactagcaacaacaacagtgtcaacatttgtgaaatatgttttctatgttactgacatg
cttatggagggacaatgggagaagaagcctgtctacacgttctacttggaacttattcgg
gacttgcttcatttgtctatgtatttgtgcttcttcctcgcaattttcacatactatggt
gtgccactgcacttgatacgtgagctctatgaaacatttaggaactttaagcttcgcatt
gctgattacattcgttatcgaaagctcacatcaaacatgaatgatcgattcccagatgct
acgcctgaagagcttaatgcaagtgacgcaatttgtatcatttgccgtgaagagatgaca
acagccaagaaactattatgtggacacctttttcatgtgtcttgccttcgatcatggtta
gagcgacagcatacctgccctacttgcagggctttagttgtacctcctgacagtgggaca
ggtacagctggcggacataggggttcacggtcagatgctcatcaacaggggacaggcaca
atggctcagggtggtggagttgctggtgatagtgtgagccaacatgaagccaggctccga
gctgctgctgctgctgcatcgatatatgagaagtctcatgtatatccttctgcaaacaga
ctagtatggtctcctggatatgcggcacttcctcaggtacaaagacatacggctgactcc
cctaatactgaatctagtggagaagcttctagtggacaatcacagccgcagcttgcaacc
cctggtggagctgcaaacttgtccttctctcagttcccaccttacatgtttgtccctggg
gccaatgtggcctatggggggaggctgagcagcgatccaaatctgacagcatctgagctg
gaggcccagaaaaagtttcttcagcaccagatagagatactgcagaatcagctccaagtt
ttacagaaaccaaaacctaaggaaagtgtggacatgggtccaacaaggccatctttggat
ggcaaaggaaagagcgttgcagctccttcatctgtttcagattgtggacgtcatgaagat
cgggttgatacgtag
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