Pyrus x bretschneideri (Chinese white pear): 103943354
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Entry
103943354 CDS
T03446
Name
(RefSeq) protein TRANSPARENT TESTA GLABRA 1-like
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
103943354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pxb04121
]
103943354
03036 Chromosome and associated proteins [BR:
pxb03036
]
103943354
Ubiquitin system [BR:
pxb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
103943354
Chromosome and associated proteins [BR:
pxb03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
103943354
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_1st
WD40
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_EIPR1
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR3_2nd
Beta-prop_WDR41
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
EIF3I
MIOS_WD40
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
103943354
NCBI-ProteinID:
XP_009351914
LinkDB
All DBs
Position
Unknown
AA seq
342 aa
AA seq
DB search
MENSTQESHLKAENSVTYESPYPLYALAFASPQTRTRHQHHRIAVGSFIEEYSNRVDILS
FDPDTLSIKPNPTLSFDHPYPPTKLMFHPNPNALHKTNDVLASSGDYLRLWEVGDSTVEP
IQVLNNSKTSEFCAPLTSFDWNDIEPRRIGTSSIDTTCTIWDIEKGVVETQLIAHDKEVY
DIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATIL
MDSNKVVILDIRSPTMPVAELERHRGSVNAIAWAPQSCRHICSAGDDTQALIWDLPTVAG
PNGIDPMSMYSAGAEINQLQWSAAQPDWISIAFSNKMQLLKV
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggagaactctacgcaagaatcgcatctcaaggcggagaactcggtgacgtacgagtcg
ccgtacccgctgtacgccttggcgtttgcctcgccccaaacccgaacccgccaccagcac
caccgaatcgccgtcggcagctttatcgaggagtactcgaaccgggtcgacatcctttcc
ttcgacccggataccctttcaataaagccgaacccgaccctctccttcgaccacccttat
ccgcccaccaagctcatgttccacccgaatcccaacgccctccacaaaaccaacgacgtc
ttagcttcctctggcgactacctccgcctttgggaggtcggtgactccaccgtcgagcct
atccaggtgttaaataacagcaagaccagcgagttttgcgctccgctgacgtccttcgat
tggaacgacattgagccccggcgaattgggacttccagcatcgacaccacctgcacaatt
tgggacatcgaaaagggggtcgtcgagacgcagctgattgctcacgataaagaggtgtac
gacatcgcgtggggggaagccagggtttttgcttcggtttcggctgatgggtcggtgaga
attttcgatttgagagacaaggagcactccactatcatctatgagagtcctcagccagat
acccctttgcttcgattggcttggaacaagcaggatttgaggtacatggccacaattttg
atggacagcaataaagttgtgatcttggatatccgatcgccgacgatgccagtggcggag
ctggagaggcacagaggtagtgtgaatgctattgcttgggccccccagagttgtaggcac
atttgctctgctggggatgacactcaggcgcttatttgggacctgcccacggtcgctggg
ccgaatggaatcgaccccatgtcgatgtactccgcaggtgcggagattaatcagctgcag
tggtctgctgcacagcctgattggatttccattgcattttctaacaagatgcagcttttg
aaggtttga
DBGET
integrated database retrieval system
