Pyrus x bretschneideri (Chinese white pear): 103943839
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Entry
103943839 CDS
T03446
Name
(RefSeq) DNA mismatch repair protein MSH7-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
103943839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pxb03400
]
103943839
DNA repair and recombination proteins [BR:
pxb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
103943839
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
RT_RNaseH_2
AAA_29
Motif
Other DBs
NCBI-GeneID:
103943839
NCBI-ProteinID:
XP_009352473
LinkDB
All DBs
Position
Unknown
AA seq
1097 aa
AA seq
DB search
MQRQQSILSFFKKPWPEKQSSDAATAPNGRRASQLPVTQQEQKTSVSKQTTAALEVTGTD
TPPEKAPRQILPVNVESLKESSPFANIMLKFMKVDDTQKAPQSQRKQSNAGSSNGCTESG
KFTEPQGLCEQAVASQHFLFNKNVTNSNEKTGEASVVHIDSDIVGPETPGAQRLVPRMKR
IQDDIPKFGDKLDGPLQNSSKRVKLLQEPAVALDKSNGEASDMASKFEWLDPSRIRDGNR
RRPDDPLYDKTTLYIPPDALKKMSASQRQYWDVKCQYMDVVLFFKVGKFYELYELDAEIG
HKELDWKMTLSGVGKCRQVGISESGIDDAVEKLVVRGYKVGRIEQLETSDQAKARGAKAV
IPRKLVQVVTPSTTTDGNIGPDAVHLLALKEVSSEVHNGSVVYGFAFVDCAALKFWIGAI
SDDASCAALGALLMQVSPKEVIYESRGLSREAQKALKKYSTGSAALQLTPVQSLTDFSDA
SEVRNVIQLKGYFKGSSNSWNHGLDSEIHHEITLSALGVLIGHLSRLMLDDALRNGDILP
YQVYRGCLKMDGQTLVNLEIFSNNADGGPSGTLYAYLDNCVTSSGKRLLRKWLCHPLKSV
EAINNRLDVVEDLLVHPEMIPLIAQYLRKIPDLERLLGRIRASVQSSASLLLPLFGKKVL
KQRVKVFGTLVKGLRSGLDLLKLLQNEGHIIERLSKVFKVPSLSGSDGLDQHLTQFEAAV
DSEFPNYQNHEATDSHAETLSILIELFIEKVKEWSDAIHAINCIDILRSFAVTASFPSGT
MSRPVILPQSEDMTLNGENQSPTLATKGLWHPFALGENGGLPVPNDLVLGEGTDGHHPRT
LLLTGPNMGGKSTILRATCLAVILAQLGCYVPCETCVLSLVDVIFTRLGATDRIMTGEST
FFVECTETASVLQHATQDSLVILDELGRGTSTFDGYAIAYAVFRHLVEKVNCRLLFATHY
HPLTKEFASHPHVTLQHMACSFKSKSACPSKSDQELVFLYRLANGACPESYGLQVAMMAG
IPEQVVEAASKAGQVMKKSIGQSFKTSEQRSEFSTLHESWLKTLLAATLTGNYNDEDCFD
VLFCLQHELKSSYRSGN
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgtcagcagtcgatcctctccttcttcaagaaaccctggcccgaaaagcagagc
tccgacgccgcaaccgcaccaaacggccgccgagcttctcagcttccggtgacgcagcag
gaacaaaagacctccgtttctaagcagactacggcggctcttgaagttaccggaactgac
actccgccggagaaggctccacgtcagattttgcctgtgaatgtggagagcctgaaagag
tcgtctccatttgccaacatcatgcttaaatttatgaaggtcgatgatacccaaaaagct
cctcagagccagaggaagcaatcaaatgctggttcctctaacggttgtacagagtctggt
aagtttaccgagcctcaaggattgtgtgaacaagcagtggcatctcaacattttctattt
aacaaaaatgttaccaattccaatgagaaaactggtgaagcttctgttgtgcatattgat
agtgacattgttgggccagaaacgcctggggcacagcgtctggttccccgaatgaaacgg
attcaagatgatattccgaagtttggggataagttagatggtccgttgcaaaattctagc
aaaagagtgaaacttcttcaggagccagcagtagccttggacaagagtaatggagaagca
tctgacatggctagcaagtttgagtggcttgacccgtcccgaatcagagatggaaataga
aggcggcctgatgatcctctctatgacaaaacaacactgtatataccacctgatgctttg
aagaagatgtcagcatcgcaaagacaatattgggatgtcaagtgtcaatatatggatgtt
gttcttttcttcaaagtgggaaaattttatgagctttatgaactagatgctgaaattggc
cataaggagcttgattggaaaatgaccttaagtggtgtagggaaatgtcgtcaggttggt
atctctgaaagtgggattgatgatgctgtcgaaaagctggttgtgcgtggctataaagtt
ggaaggatagagcagctggagacttctgatcaagcaaaagccagaggtgccaaagctgtc
attccgagaaagttggttcaggtagtcacaccatcaaccacaactgacggaaatattggg
cctgatgctgttcatcttcttgcattaaaagaggtgagctctgaggtgcataatggttca
gttgtatatggatttgcttttgttgattgtgctgctttaaagttctggattggtgccata
agtgacgatgcctcctgtgctgctttgggggctttattgatgcaagtgtcacctaaagaa
gttatatatgaaagtagagggctgtcaagagaagctcaaaaagccttaaaaaagtactca
acaggttctgctgcactgcaactgactccagtgcagtcactcactgatttttcggatgct
tctgaagttagaaatgtaattcagttgaaagggtacttcaaagggtcttctaattcatgg
aatcatggacttgacagtgagatacaccatgaaatcactttatctgcacttggcgttctt
attggccatctatccaggttgatgttagatgatgctttacgaaatggagatatattacct
taccaagtttataggggttgcctcaaaatggatggacagacactggtaaatctggaaatt
ttcagtaataatgctgatggtggtccatcaggtacactgtacgcatatcttgataactgt
gtaacatcatccggtaagcggcttttgaggaagtggctctgccatcctctgaaatctgtt
gaagccattaataataggcttgatgtagttgaagatctactggtacatccagaaatgata
ccccttattgctcaatatcttcgcaagattccagacctagaaaggttactcggacggatt
agggcaagtgttcagtcctcagcttctctcctactcccgttgtttggcaaaaaagtattg
aaacagagagtgaaagtgtttgggactcttgtgaagggcctgagatctggattggatttg
ttaaagctattacagaatgaagggcatatcattgaacgattatcaaaagtatttaaagtt
ccaagtctgagtggcagtgatgggcttgatcaacatcttacccaatttgaagctgctgta
gatagtgaattcccaaattaccagaatcacgaggcaactgattcacatgccgaaacactc
tccatcctgattgagctatttatcgagaaagtaaaagaatggtctgatgccatacatgcc
atcaactgtattgatatactaagatcttttgcagttactgcaagtttcccatctgggacc
atgtccagacctgttattttgcctcaatcagaagatatgactttgaatggagagaaccaa
agtcctacacttgctactaaaggactatggcatccatttgctcttggggaaaatggagga
ctgcctgtcccaaatgaccttgtcctaggcgagggtacagatggccatcatccacgcact
ttactactgactgggccaaatatgggtggaaaatcaactattcttcgtgccacatgtctt
gctgttatactagcccagctgggttgttacgtgccttgtgagacatgtgttctctcactt
gtagatgtcatcttcacacggcttggagccactgatcgtatcatgactggcgagagtacg
ttcttcgtggaatgcacagaaacagcatcagttcttcaacatgccactcaagattctttg
gttattcttgatgaattgggtcgtggaacgagcacttttgatggatacgcaattgcatat
gctgtctttcgccatcttgtcgagaaggttaactgcagattattgtttgcgactcactat
cacccgctaaccaaggaattcgcttctcatccacacgttacgttacaacacatggcatgt
tctttcaagtcaaaatctgcatgcccttcgaaaagtgaccaagagctggtatttctctat
cgccttgccaatggggcatgcccagagagttacggactgcaagtagcaatgatggctggg
atcccagagcaggtggtcgaagctgcttcaaaggccggccaagtaatgaagaaatccatt
ggacaaagtttcaagaccagcgaacagagatcagagttttctactctccacgagagctgg
ctgaagaccctgctagctgccacgctgaccggtaattacaatgacgaagattgttttgat
gtgctattttgtttgcagcacgaacttaagagctcgtatcgatcgggcaactga
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integrated database retrieval system
