Pyrus x bretschneideri (Chinese white pear): 103943879
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Entry
103943879 CDS
T03446
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase ATL42
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pxb04121
]
103943879
Enzymes [BR:
pxb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103943879
Ubiquitin system [BR:
pxb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
103943879
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
RING_XB3-XBAT31
Prok-RING_4
zf-RING_16
zf-HC5HC2H
zf-RING_4
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
103943879
NCBI-ProteinID:
XP_009352520
LinkDB
All DBs
Position
Unknown
AA seq
451 aa
AA seq
DB search
MYIXFVFSPAECSEKMIKISGFQNLDLPMFHSSMFVLLLNCVIFHVESQSLGSDMASDEE
TKYQQSVRTVIGVLSVMFAFLFTLLVYAKYCHRRVPVRENSLLETGLISRSSRFSGIDKT
VIEALPFFRFSSLKGSREGLECAVCLSKFEDIEILRLLPKCKHAFHINCIDHWLEKHSSC
PLCRHKVSSEDLTFVTFSNSMRVLSNNQSEYRQDSNIDLFVQREEDRCGSSRFSIGSSFR
KSEKVVEKEAELLIKAEAACGDVTKEDDKILHKHKHKILFSAFEFNNRWSNLSSSDLMFL
NSEMLNTVSSNRFSPIKLNDEQLLTAKASGNEEIMKIKEEMEMKRLFENKVSTMNKNSSA
TYSIVPSTSDSIATSAHASSSTNRGEKRSMSEITALSRFGNLGFTNRTREPSLLENNPKE
DRMTRLWMPIARRTVQSFAIREKRSPQHLDV
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtatatataattcgttttttctcctgcagaatgctccgaaaagatgattaaaatttcg
gggtttcaaaatctcgaccttccaatgtttcattcaagcatgtttgttttgcttctcaac
tgtgtgatcttccatgttgaatcacaatccttaggctcagatatggcttctgatgaagaa
actaaatatcaacaaagtgttcgtacagttatcggtgttctatctgtcatgtttgcgttc
ctttttactctcctagtttatgccaaatactgccatagaagagttcctgttcgagaaaac
agtctcctggaaacgggacttatcagtagaagctcccggttttcggggattgacaagacg
gtgattgaggcacttccgtttttcagattctcttctctcaaagggtcaagggaaggtctc
gaatgcgcagtctgcctatcgaaattcgaagatattgagattctcagattgcttccaaaa
tgcaaacatgcttttcacatcaactgcattgatcactggctggaaaagcactcaagctgt
cctctctgccggcacaaggttagctctgaggatcttacgttcgttaccttctcgaatagc
atgagggtcttgtcgaataaccaatcagagtatcgacaggactcgaacatagatctcttt
gttcagagagaggaagatcgctgcggttcttcgagattcagcatcggaagcagctttcga
aaaagcgaaaaggtggttgagaaggaagctgaactgctaatcaaggcagaagctgcttgt
ggtgatgtgacaaaagaggatgacaaaatcctgcacaagcacaagcacaaaattcttttt
tccgctttcgagtttaacaacagatggagcaatctgagttcgtctgatcttatgttcttg
aattcggaaatgctcaacacggtgtcaagcaatagattctctcccataaaactaaacgat
gagcagcttttgaccgcgaaagcatcgggaaatgaggagattatgaagatcaaggaggag
atggagatgaagagattgttcgagaacaaagttagtacaatgaacaaaaacagttcagct
acatactcaattgttccctctacatcagacagtatagcaacttcagctcatgcctcgagt
tcaacgaatcgaggagagaaaagatcaatgtccgaaatcactgctctttcgagatttgga
aacttgggtttcaccaacaggactagagagccttctctactcgaaaacaacccgaaagag
gataggatgacgcggctttggatgccgattgccagaagaacagtccagtcgtttgccatt
agagagaaaaggtctccacagcatttagatgtatga
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