Pyrus x bretschneideri (Chinese white pear): 103944215
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Entry
103944215 CDS
T03446
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03020
RNA polymerase
pxb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
103944215
09124 Replication and repair
03420 Nucleotide excision repair
103944215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pxb03021
]
103944215
03400 DNA repair and recombination proteins [BR:
pxb03400
]
103944215
Enzymes [BR:
pxb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
103944215
Transcription machinery [BR:
pxb03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
103944215
DNA repair and recombination proteins [BR:
pxb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
103944215
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
MRNIP
Motif
Other DBs
NCBI-GeneID:
103944215
NCBI-ProteinID:
XP_009352922
LinkDB
All DBs
Position
Unknown
AA seq
1193 aa
AA seq
DB search
MEEEHEYDDQQYMEDDDEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVD
ESADIEIRPESQHNPGHQPDFAETVCKISFGQIYLSKPMMTESDGETATLFPKAARLRNL
TYSAPLYVDVSKRMIKKGHDGEELTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTEL
GECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPS
TMFVRMLARTSSKGGSSGQYIKATLPYIKGEIPIIIVFRALGFVADKDILEHICYDFSDT
QMMELLRPSLEEAFVIQNQQVALDYIGKRGANVGVSRDKRIKYAKEILQKEMLPHVGVGE
FCETKKAYYFGYIVHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRNLFRKLTKDV
RAYAQKCVDNGKDLNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYA
STLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGS
AAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPEMLVRTLRKLRRRVDV
NTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKGDIHALQQRESPEDAGWHDL
VAKGYIEYIDTEEEETTMISMTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIP
FPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQL
PAGINAIVAISCYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP
DRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPMAQDEAPGQASSRYTRRDHS
ISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED
MPWTVEGVTPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA
LHSCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP
AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNS
FECRGCKNKTDIVQVYIPYACKLLFQELMSMAIAPRMLTKDIKPAKNQKKKGG
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggagcacgagtacgacgatcagcagtacatggaggacgacgacgaagacgaa
atcacgcaggaggacgcgtgggccgtcatctccgcttacttcgaggagaagggcttggtg
cgccagcagctcgactcgttcgacgagttcattcagaacacaatgcaggagattgtcgac
gagtctgccgatattgagattcggcctgagtcgcagcacaaccctgggcaccagcccgat
ttcgccgagactgtatgcaagattagctttggtcagatttatttgagtaagcccatgatg
accgaatctgatggagaaactgcaaccttatttcccaaagctgcaaggctgagaaatctg
acgtactcagcacccttgtatgtggatgtctcaaagaggatgataaagaaaggacacgat
ggcgaagaactcaccgagacccaggatttcaccaaagtattcattgggaaggttcctata
atgcttcggtctagttattgcacactgtaccagaattcagagaaagatttaactgagctg
ggagagtgtccatacgatcaaggtggatattttattataaatgggagtgaaaaggttctt
attgctcaagagaagatgagtaccaatcatgtctatgtgttcaagaagaggcagccgaac
aagtatgcctatgtggctgaagttcggtctatggcggagtctcaaaacaggccgcccagt
accatgtttgttcggatgcttgcccggactagttctaaagggggttcttcgggacagtat
atcaaagctacacttccttatattaaaggggaaattcctattattatcgttttccgggct
cttggatttgttgccgataaagacatcctcgagcacatatgttatgacttttctgatact
caaatgatggagttgctcagaccttctttggaagaagcatttgtgattcagaatcaacag
gttgcactagattatattggaaagagaggtgcaaatgttggtgtaagtagagacaagaga
atcaagtatgcgaaagagattctacaaaaggaaatgcttccacacgttggtgttggagaa
ttttgtgagacaaagaaagcttactattttggatatatcgttcacaggcttctactctgt
gcacttggtcggaggccagaggatgacagggatcattatggtaacaagcggcttgatctt
gctggtcccttacttggaggcttgtttagaaatctattcaggaagttgactaaggatgtg
agagcttatgcacagaagtgtgttgacaatggaaaggatcttaatctgcaatttgccatc
aaagctaaaaccatcacgagtggcctcaaatattcacttgccactggaaactggggacaa
gcaaatgcagctggtacaagggctggagtgtcgcaggtgttaaatcgtttgacatacgca
tccaccctctcacacttgagaagactgaattctccaatagggcgtgaagggaaattggct
aaaccacgccagctgcataattcgcaatggggaatgatgtgcccagctgaaacacccgaa
ggccaagcgtgcgggcttgtcaagaatcttgcattgatggtatacataacggtaggatca
gctgcatatccaatcttggaatttttggaagaatggggtacagaaaactttgaggaaatt
tctcctgcggttataccccaagctacaaaaatttttgtgaacggttgttgggttggaatc
catcgtgatcctgaaatgttggtgagaaccttaagaaagctaaggcgaagggttgatgtc
aacactgaagttggggttgtgagggatatccgtctgaaagaattgcgtatatatactgac
tatggccgttgcagtcgtccattattcattgtggacaaacagaggcttctcataaagaag
ggagatattcatgcattgcagcagagggaaagccctgaagatgctggttggcatgacctt
gtagcgaagggatatattgaatatattgacactgaagaagaggagactacaatgatttcc
atgacaattaatgatcttgtccaggcaagactcaatcctgaggaggcatattcggacact
tatacacattgtgaaatccacccatcacttattttgggtgtttgtgcttctattatacca
tttcctgatcataatcagtctccacgtaatacgtatcaatctgctatggggaagcaagct
atggggatttatgtcaccaattatcagttccggatggatacattggcgtatgttttatac
taccctcagaaaccgcttgtcaccacacgagctatggagcatctccacttccggcagctt
cccgctggcatcaatgctattgttgccatttcttgttattccggttataaccaggaagat
tctgtcattatgaatcaatcctctgtggaccgtggattcttccggtcactattcttccga
tcttatagggacgaggagaaaaagatggggacccttgtcaaagaggattttgggcgtcct
gacagagcaaatactatgggtatgcgacatggttcttatgacaaattggatgatgatggt
cttgctcctcctggaactagagtttcaggtgaggatgtcatcataggaaagaccacaccc
atggctcaggacgaggctccagggcaagcgagttcgcgttacacacggcgtgaccacagc
ataagcttgcgccacagtgaaaccggcatagttgatcaggttctactgacgaccaatgcc
gatgggttgcggtttgtcaaagtaagggtgaggtctgtcagaataccacagattggtgac
aaattcagtagcagacatggacagaaggggacagtgggcatgacttatacgcaggaagac
atgccatggactgtggaaggggtcacacccgatataatcgtgaacccacacgctattcca
tctcgtatgacaattggtcagctgattgagtgtatcatggggaaggttgcagctcacatg
ggaaaggaaggagatgctactccttttacagatgtgacggtggacaatatcagtaaagct
cttcacagttgtggttatcaaatgcgtggattcgagaccatgtataatggtcacacgggc
aggcggctcagtgctatgatattccttggccccacatattaccaaagactgaagcacatg
gtcgacgacaagatccattcacgtggacggggcccagtgcagatcctcacaaggcagcct
gctgagggacggtctcgtgatggtggtctacgatttggagaaatggaacgagattgcatg
attgcccatggtgctgctcactttctgaaagaaagattgttcgaccagagtgatgcatat
agggttcatgtctgcgagcgttgtgggttaatagctattgcaaatctcaagaagaattcg
tttgagtgcaggggttgcaagaacaaaactgacattgttcaggtttacattccttatgcc
tgcaagctgctattccaagagctcatgtcgatggccatagcgccaagaatgctcacaaag
gacataaagccggccaaaaaccaaaagaagaaaggaggctga
DBGET
integrated database retrieval system
