Pyrus x bretschneideri (Chinese white pear): 103944365
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Entry
103944365 CDS
T03446
Name
(RefSeq) probable polyribonucleotide nucleotidyltransferase 1, chloroplastic isoform X1
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103944365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxb03019
]
103944365
03016 Transfer RNA biogenesis [BR:
pxb03016
]
103944365
Enzymes [BR:
pxb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
103944365
Messenger RNA biogenesis [BR:
pxb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
103944365
Transfer RNA biogenesis [BR:
pxb03016
]
Prokaryotic type
tRNA degradation factors
103944365
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
Motif
Other DBs
NCBI-GeneID:
103944365
NCBI-ProteinID:
XP_009353073
LinkDB
All DBs
Position
Unknown
AA seq
926 aa
AA seq
DB search
MLANPDSGRLHCPNPSQFLNPNRPKCFLFPNCPRSPNFPSKSKFCNLSLLLPRQTGKKGL
AIRALSEPRGVSTSGGPQGYPQPYSVKIPVGDRHILVETGHIGRQASASVTVTDGETIIY
TSVCLADTPSEPSDFFPLSVHYQERFSAAGRTSGGFFKREGRAKDHEVLICRLIDRPLRP
TMLNGFYHETQILSWVLSYDGLHSPDSLAVTAAGIAVALSEVPNSKTVAGVRIGLVGDKF
IVNPTTKEMEDSELDLLVAGTDNAILMIEGYCDFLTEEKLLQAVEVGQDAIQAICNEVEA
LVKKCGKPKMLDAIKLPPPELYNHVEEIASDELIRALQIKDKIPRRKALLSLEGEVLTIL
TEKGYVSKDAALVGSETIPDIFEDEEEDEEVVVDGEVDEGDVHIKPSSRKSTPLFFSEVD
VKLVFKEVTSKFLRRRIVEGGRRSDGRTPYEIRPINSKCGLLPRAHGSALFTRGETQSLA
VVTLGDKQMAQRVDNLVDVDEWKRFYLQYTFPPSCVGEVGRNGAPSRREIGHGMLAERAL
EPILPSEDDFPYTIRVESTITESNGSSSMASVCGGCLALQDAGVPIKSSIVGIAMGMVLE
TEEFGGNGAPLILSDITGSEDASGDMDFKVAGNEDGVTAFQMDIKVSGITLPVMREALLQ
AKDGRKHIIAEMLKCSSPPSRSLSKYAPLIHIMKVNPEKVNLIIGSGGKKVKSIIEESGV
DTIDTQEDGIVRITSRDLSSIEKAKAIITNLTMVPSVGDIFRNCEIKSIVPYGVFVEIAP
GREGLCHISELSSEWLAKAEDAVKVGEYIDVKLIEVNEKGQLRLSRKALLPDTDAEKASS
KQPTGDSNDVASQETSDKGSTKKIISTPKRDVAEELPQKKFIRRLVSAAKDGPNINKDKA
KKSSKVVGSVSSKDENTLVNGEANIG
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgttggcaaatcctgacagtggcagactccactgccctaatccctcccaattcctgaac
ccaaacaggcctaaatgtttcctctttccaaactgccctcgttccccaaacttccccagc
aagtccaagttctgcaacttgtccctgcttctgcccaggcagaccggcaagaagggtctt
gccatcagagctttgtccgagccccgcggtgtttcgacgagcggtggtcctcagggatac
cctcagccgtactctgtcaaaatccctgttggtgatagacatattttggttgagacaggt
catattgggagacaagccagtgcttctgttacagtgacagatggagaaaccattatttac
acatctgtttgtctggccgacactccaagtgagccttcggacttcttccctctttcggta
cattatcaggagcgcttttcagcagcaggtcgaactagtggaggcttcttcaaacgagaa
ggaagggcgaaagatcatgaggttctcatttgtagattgattgataggcctttgcgtcca
actatgttgaacggcttctaccatgaaactcagatactttcttgggttctgagttatgat
ggtttgcactctcctgattctttggcagtcacagcagctggaatagcagtggctctttct
gaagttccaaactcaaaaactgtagcaggagtgcgaattggtcttgttggtgacaaattt
atcgtgaatccaacaacaaaggagatggaagactctgagttggacttgttggtcgctggc
acagataatgcaatattgatgatagagggctattgtgattttctcacagaggaaaagttg
ctgcaagcagtagaagttgggcaggatgccatacaagcaatttgcaatgaggtagaagct
ttggttaagaagtgtggaaagccaaaaatgcttgatgcaatcaaattacctccccctgag
ctatataatcatgttgaggaaattgccagtgatgagttgataagagctctgcagattaag
gacaagattcctagaaggaaggctctcttgtctttggaaggagaagttttaactatactt
acagaaaagggatatgttagtaaggatgcagctctcgtaggcagtgaaacaataccagat
atatttgaagatgaagaggaggatgaggaagtggttgtggatggtgaagtagatgaaggt
gatgttcatataaagcctagttcacgaaagtcaacccccttgttcttttctgaggtagat
gtgaagctggtattcaaagaagttacatccaaatttttacgaagacgcattgtggagggt
ggaagaagaagtgatggacgtaccccatatgagatacgtccaatcaactcaaaatgtgga
ctgcttccaagggcacatggaagtgctcttttcacacgtggggaaacccagtcattggct
gttgttacactcggggataaacagatggcacagagggtagacaacctagtagatgttgac
gaatggaagagattctatctccagtacacatttcccccttcatgtgttggggaagttgga
cggaatggagcccctagtagaagagaaattggccatggaatgcttgctgagagagctctt
gaaccaattttgccttccgaagatgattttccttacactatacgtgttgagagtacaatt
actgaaagcaatggctcttcaagtatggcatctgtttgtgggggctgcttagctttacag
gatgctggtgttccaatcaagtcctctatagttgggatagcaatgggtatggttctggaa
actgaggaatttgggggaaatggtgctccactaattctgtctgacataactggatctgaa
gatgcatccggggatatggatttcaaggttgccggaaatgaagatggtgtaactgcattt
cagatggacataaaggtgagcgggattacattaccagttatgagagaggcactcctacag
gcaaaggatggccgtaagcatattattgcggaaatgttgaagtgctcatctcctccttca
agatcgctttctaagtacgcaccactgattcacataatgaaggtcaacccggagaaagta
aacttaatcattggtagtggtgggaagaaggtgaagagtattatagaagagtctggagta
gacacaattgacacacaagaagacgggatagtgagaattaccagcagggatttgtctagc
atagaaaaggctaaagctattattactaacttgacaatggttccgtcagttggtgatatc
ttcaggaactgcgagatcaaatcaatagttccatatggagtatttgtggaaatagcacct
gggcgtgagggactttgccatattagcgagttgagttcagagtggctggcaaaggcagaa
gacgctgttaaagttggagagtatattgatgttaaacttattgaggtaaatgagaagggg
caacttcgccttagccgcaaagctttacttccagatacagatgcagagaaagccagttca
aagcagcctacgggtgactccaatgatgtagcttcccaagaaacatctgacaagggttca
acaaagaaaattattagcactccaaagagggacgtagctgaagagctcccacaaaagaag
ttcattcggagattagtcagtgctgccaaagacggaccaaatatcaacaaagataaagca
aagaagagcagtaaagtagtcggtagcgtctccagcaaggacgaaaatactttagtgaat
ggagaggctaacattggatag
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