Pyrus x bretschneideri (Chinese white pear): 103944397
Help
Entry
103944397 CDS
T03446
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03013
Nucleocytoplasmic transport
pxb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103944397
09122 Translation
03013 Nucleocytoplasmic transport
103944397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxb03019
]
103944397
03041 Spliceosome [BR:
pxb03041
]
103944397
Messenger RNA biogenesis [BR:
pxb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
103944397
Spliceosome [BR:
pxb03041
]
Complex C
Other components
EJC/TREX
103944397
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
103944397
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Mitoc_mL59
Motif
Other DBs
NCBI-GeneID:
103944397
NCBI-ProteinID:
XP_009353122
LinkDB
All DBs
Position
Unknown
AA seq
603 aa
AA seq
DB search
MEVFRTAILQPGPPERFALQTVQQVIQPQKQTKLVQDENQLLENILRTLLQELVSSAVQS
GEQIMQYGQSIDAGETAQGHIPRLLDVVLYLCEKEHVEGGMIFQLLEDLTEMSTMRNCKD
VFGYIESKQDILGKPELFARGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSE
RSAVNIKGVFNTSNETKYEKDPPDGISIDFNFYKTFWSLQESFCNPPSLTLGPTKWKKFT
SGLMVVLNTFEAQPLSDEEGDANNLEEEATNFSIKYLTSSKLMGLELKDPSFRRHILVQC
LILFDYLKAPGKSEKDLPSESMKEEIKSCEERVKKLLEMTPPKGKEFLNKIEHILERERN
WVWWKCDGCPPFEKQPMEKKVIQEGAKKRRPRWRMGNKELSQLWKWADQNPNALTDPQRV
RTPSITEYWKPLVEDMDPAAGIEPEYHHKNSRVYCWKGLRFSARQDLEGFSRFTEHGIEG
VVPLELLTPEERSKYQAKPNDRSKRAKKEESKGAAHRLEENQNATPASELDGEASGTPMD
ADTIAAAGNMSQGGSPIPDEHQKQSSDADVGQEGGQLEADAEVEVGAGMLDGEDAEADLD
PVG
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgttcaggacggccatattgcagcccggtccacctgaaaggtttgcccttcag
acagttcaacaagttatacaacctcagaaacaaacaaagttagtccaagatgagaatcaa
ttgctagaaaatatccttcggacattgcttcaggaactggtgtcttctgcagtacagtct
ggtgagcagataatgcagtatggtcaatcaattgatgctggagaaactgcccaaggacat
attccacgtcttcttgacgttgtgttgtatctttgtgagaaagagcacgtcgaaggcggc
atgatctttcagctgttggaagacttaacagaaatgtcaactatgagaaattgcaaagac
gttttcggttatattgagagtaaacaagatatattaggaaagcctgagctttttgctcga
ggaaaacttgtgatgttgagaacatgcaatcaacttcttcgtcgtctgtcaaaggcaaat
gacgtggtattttgtggacgaattctaatgtttttggcacactttttcccattatctgag
cgttcagctgttaatataaaaggagtttttaacacatcaaacgagacaaaatatgagaaa
gacccccctgatggaatttccatcgatttcaacttttacaaaaccttttggagtttacag
gaaagcttctgtaaccctccttccttaactcttggtcctaccaagtggaagaaatttacg
tctggtttaatggttgttttgaatacctttgaagctcaaccattaagtgatgaagaggga
gatgccaataacttggaggaggaagcaacaaattttagcataaaatatcttacaagcagt
aaactgatgggtttggagttgaaggatcccagtttccgacgtcacattcttgtgcagtgc
ctcatattgttcgattatctgaaggccccgggaaaaagtgaaaaagatttaccttctgaa
agcatgaaagaggaaataaaatcttgtgaggagcgtgtcaaaaagctgcttgagatgact
ccgcccaaagggaaggaatttcttaataaaattgagcatatattggaacgtgaaaggaat
tgggtatggtggaaatgtgacggttgtcccccatttgagaagcagccaatggagaaaaag
gtgatccaagaaggagccaaaaagcgtaggccgagatggagaatgggaaataaagaacta
tctcagttgtggaagtgggcagatcagaatccgaatgctttaactgatcctcaacgtgtt
cgaacaccttccatcactgagtactggaagcccttggttgaagatatggatccagcagct
ggaatagaacctgagtatcaccacaaaaatagccgagtttattgctggaaaggtcttcga
ttttcagctagacaagacttggaaggattttctcgatttactgaacatggtattgaagga
gttgtaccgctggagcttttgactcctgaggagcggtctaaataccaagctaaaccaaat
gacaggtctaaacgtgctaaaaaggaagaatcaaaaggtgctgcacatcgattagaagaa
aatcagaatgctacacctgcaagtgaattagatggtgaagcctcagggacgccaatggac
gctgataccattgctgcagccggcaacatgtcccaaggtggaagtccaatccccgatgaa
catcagaagcaaagctccgatgcggatgtgggtcaagagggaggtcagttggaagcagat
gctgaggtcgaggttggggcagggatgcttgatggtgaggatgcggaggctgatttggat
ccagttggttag
DBGET
integrated database retrieval system
