Pyrus x bretschneideri (Chinese white pear): 103944939
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Entry
103944939 CDS
T03446
Name
(RefSeq) U-box domain-containing protein 13-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
103944939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pxb04121
]
103944939
Enzymes [BR:
pxb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103944939
Ubiquitin system [BR:
pxb04121
]
Ubiquitin ligases (E3)
U-box type E3
103944939
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
MLKL_N
HEAT_2
zf-RING_UBOX
HEAT_EZ
Neurochondrin
KAP
zf-Nse
Arm_2
zf-C3HC4_4
MCAfunc
zf-C3HC4_2
zf-C3HC4
NGO1945_C
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
103944939
NCBI-ProteinID:
XP_009353694
LinkDB
All DBs
Position
Unknown
AA seq
661 aa
AA seq
DB search
MEEDRGALVQSLIDTVNEIASISDYKCTVKKQYCNLARRLKLLTPMFEEIRDSKEVVSQE
TLKALLSFMEALESAKELLRFGSESSKIYLVLEREQIMMKFHEVTARLEQVLSGISYENL
DISDEVKEQVELVLAQFRRAKGRFDLPDVELYGDLLSLYSKNEAATDPAVLRRLVDKLEL
TGIAELTEESLALHEMVTFSGGDPGESIEKMSMLLKKIKDFVQTENPDMDAPAAGKNILA
SCSGQASTDKNHKVPPVIPDDFRCPISLELMNDPVIVSTGQTYERSCIEKWLEAGHVTCP
KTQQSLSNTTLTPNYALRSLIAQWCEANGIEPPKRPNSRPIKTTSACSPAERTKIEILLR
KLMSVSPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRTQEHAVTALL
NLSICEENKGSIISSGAIPGIVHVLKNGGMEARENAAATLFSLSVVDENKVRIGASGAIP
PLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVSTLMKLLTEPGGGMVDEALA
ILAILSSHGEGKAAIGAAEAVPVLVEVIGTGSPRNRENAAAVLVHLCSGDQQHIVEAQEL
GVMTLLLELAQNGTDRGKRKAAQLLERMNRFAEQQAQAQAQADDQSETQSHPPTTTNAVD
R
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagacagaggagctctggtgcagagcctgatcgacacggtcaacgaaatagct
tcgatctctgactacaagtgtacggtcaagaagcagtactgcaatttggcgaggaggttg
aagctgctgaccccaatgttcgaggagattagggatagcaaggaggtggtttctcaggag
actttgaaagccttgctttcgttcatggaagctctggaatcggccaaggagctgctcaga
ttcggaagcgaaagcagcaagatttacctggttttagaaagggagcaaattatgatgaag
tttcatgaggtgacagctcgattggagcaagttttaagtggaatctcctatgaaaatctt
gacatatcagatgaagttaaggaacaggttgagcttgttcttgctcagtttagaagagcc
aaaggaaggttcgatttgcctgatgttgagctctatggagatctcttgtccctttacagt
aaaaatgaggcagcaacagatccagctgtcctaagaagattggttgataagttagaattg
acaggtatagctgaactcacagaagagtcactagccttgcatgagatggttactttcagt
ggtggggatcctggggagagcattgagaagatgtcaatgctactgaaaaaaattaaggat
tttgtacaaacagaaaaccccgacatggatgctcctgcagcgggaaagaatatattagca
agctgcagcgggcaagcatccaccgacaagaatcacaaagtccccccagttataccagat
gattttcggtgtccaatatctttggagttaatgaatgaccccgtcattgtttcaacaggg
cagacatatgagcgttcctgtattgagaagtggctggaagcagggcatgtgacatgtccg
aaaacacaacaaagcctctctaacaccaccctcacaccgaactatgctttacgtagcctc
atagcccagtggtgtgaggcaaatggcattgaaccaccaaaaagacccaattctcgacct
attaaaactacatccgcctgctctccagcagaacgcactaagattgaaattctcctccgc
aagctgatgtctgttagccctgaagatcaaaggtctgctgcgggtgaaatccgccttctt
gccaaacgtaatgcagacaatcgtgtggctattgctgaagctggtgcaatacccctgctt
gtaggcctcctttcaacccccgactcccgcacccaagagcatgctgtcacagcactcctc
aacctttccatatgtgaggagaacaaaggaagcatcatatcctctggagcaattcctggt
attgttcatgtcctcaagaatggaggcatggaagcacgggaaaatgcagctgcaaccctt
tttagtctttctgtcgtggatgaaaataaagttagaattggtgcttcaggagccattccg
ccacttgttacattgctgagtgaaggtacccaaagggggaagaaagatgctgcaactgca
ctttttaacttgtgcatttatcaaggtaacaaggggaaggcagtaagggccggtgttgtt
tcgaccctaatgaagctgctaacagaacctggaggtggaatggtggatgaagcactggcc
attctagcaatactctctagccacggtgaagggaaagcagccattggagctgctgaggca
gtgcctgttttggttgaagttattgggacaggatctccccgaaacagagaaaatgcagct
gcggttttggtgcatctttgttctggtgaccaacaacatatagtcgaggctcaggaactt
ggggtgatgactttgttattggagttggctcaaaatggcacagatagaggcaagagaaag
gctgcacagttgcttgagcgaatgaatcggtttgctgagcagcaggcgcaggcgcaggca
caagctgatgatcaatctgagacccagtcacatccacccaccacgacaaatgccgttgac
agatag
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integrated database retrieval system
