Pyrus x bretschneideri (Chinese white pear): 103945595
Help
Entry
103945595 CDS
T03446
Name
(RefSeq) flowering time control protein FY-like
KO
K15542
polyadenylation factor subunit 2
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103945595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxb03019
]
103945595
Messenger RNA biogenesis [BR:
pxb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
103945595
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
WD40_Gbeta
WDR55
EIF3I
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_Aladin
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_WDR41
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
eIF2A
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_HPS5
Tricorn_2nd
Beta-prop_DCAF12
Beta-prop_Vps41
NBCH_WD40
WD40_like
WD_LRWD1
WD40_RFWD3
PROPPIN
B-prop_COPA_B_2nd
Motif
Other DBs
NCBI-GeneID:
103945595
NCBI-ProteinID:
XP_018502583
LinkDB
All DBs
Position
Unknown
AA seq
752 aa
AA seq
DB search
MMYPDAQQQHHQQQHPQHQPEHQQKHPQHQQQHLQQHQQQHLQQHQQQHLQLHQQHQQQG
GEFHRGPLPPALMMRQPSASSTNMPPEYHNQPGLAPPYDAHADSFPGKRMKKLTHRRAVD
YTSTVVRYMQIRMWQRDARDRTVLQPTPAAAIDMLPSVAYSDNPSTSFAAKFVHTSLNKN
RCPINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAIRSMVWSHNDNWMVS
GDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCKTDLKFCSCSDDNTVKVWDFARCQEE
RTLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLSVKWNQN
GNWVLTASKDQIIKVYDIRAMKELASFRGHRKDVTALAWHPFHEEYFVSGSFDGSIYHWI
VGHETPQVEIPNAHDHSVWDLAWHPIGYLLCSGSNDHTTKFWCRNRPGDTGRDKSNTSQN
QGYGEQNPAFGGRMTGNFPVPEGPPTPGPFVPGLTRNEGTIPGVGVAMPLSLDASNQGEQ
QQPHALSMALGAPPLPPGPHPSLLAVNQQQQYQQIPQQMPQHQHQHQGHPQQMPPMSMAP
PNMPHLQPPSHLPLLPHPHLHRPPPQMPPLGMPSSGPVSMPSSVPTSHSMPMGIQGTMNQ
MGHPLPQGHFMGMNPMHSGSLPTSGGFPNGMPNMQGATNASGAQMYPQGGAFNRGQPGQM
PMHPGYNPYQSRGQSGMPQPPPGPPMHGQTPQ
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgatgtaccctgatgcacaacagcaacaccaccaacaacagcacccacaacatcagccg
gaacatcagcagaaacatcctcaacatcagcagcagcatttgcaacaacatcagcagcag
catctgcaacaacaccagcaacagcatttgcaactacaccagcaacatcagcagcaaggt
ggagaatttcatagaggcccgctgccaccggccctaatgatgcgtcagccgtcggcttct
tcaactaatatgcccccagagtatcacaaccaacctgggctcgctcctccttatgatgct
catgctgacagttttcctggaaaaaggatgaaaaagcttacacacaggagggcagttgat
tatactagcactgtagtgcgatatatgcagattcgaatgtggcagcgcgatgcaagggat
agaacggtattgcaacccacacctgcagcagcaattgatatgttgccgtcagttgcctac
tcagataatccatccactagctttgctgcaaagtttgtacacacttctttaaacaagaat
cgttgtccgattaatcgggttttgtggactcctacaggaagacgtcttattactggctct
caaagtggggaattcactctttggaatggacaatcatttaactttgaaatgattcttcag
gctcatgatcaagcaatcaggtctatggtgtggagtcataatgacaattggatggtctct
ggtgatgatggcggtgcaataaagtattggcaaaacaacatgaataatgtaaaggcaaat
aaatctgctcataaagaatctgttcgcgacttaagcttctgcaagactgacttgaaattc
tgttcctgctccgatgataatactgttaaagtttgggactttgcacggtgccaagaagag
cgcacactgactggccatggttgggatgtgaagagtgttgactggcaccctactaaatct
ctactagtttcaggtgggaaagacagtcttgttaaactttgggatgctaagtcagggcga
gaactctgttcgtttcatggccataaaaatatggtgctctcggttaaatggaaccaaaat
ggtaactgggtgctaactgcttcgaaggatcaaatcatcaaggtttatgacataagggcc
atgaaagaacttgcatccttccgcgggcatcgaaaggatgtgactgctctggcttggcat
ccgtttcatgaagaatattttgttagtgggagttttgatggatccatttaccattggatt
gttgggcatgaaactccccaggttgaaattcccaatgcacatgatcacagtgtgtgggat
cttgcatggcatcctatcggttatcttctctgcagtggtagcaatgatcacactacgaag
ttttggtgcagaaataggccaggagatactggtcgtgataaatctaacaccagccaaaat
caaggttatggtgagcaaaaccctgcttttggtggtcgcatgactggtaattttccagta
cctgaaggaccaccaactcctggaccctttgttcctgggttgactcgaaatgaaggaact
attccaggtgttggagttgctatgccgttatctcttgatgcatcaaatcagggggagcaa
cagcagcctcatgcactttcgatggcgttaggtgctccacctctcccgcctggtccacac
ccctctcttcttgctgtgaatcagcagcaacaatatcagcaaattcctcaacagatgcca
caacaccaacaccaacaccaaggtcacccgcaacaaatgccccctatgtctatggcacct
ccaaatatgccacatttgcagcctccatcccatttacccttgctgccacatcctcattta
catcgaccgccaccccaaatgccaccacttggtatgccatcttcagggcctgtatctatg
ccttcatctgttcctacctcacattcaatgccaatgggaattcaaggtacaatgaatcag
atgggtcacccattgccacaaggtcattttatgggcatgaacccaatgcactcgggatct
ctgcctacaagtggaggttttccaaatggtatgccaaacatgcagggcgcaacaaatgca
agtggagctcaaatgtatcctcagggtggcgccttcaatcggggtcagcctgggcaaatg
cccatgcatccggggtataatccttatcagtctaggggtcaatctggtatgccccaacct
ccaccagggccaccaatgcacgggcaaacacctcagtag
DBGET
integrated database retrieval system
