Pyrus x bretschneideri (Chinese white pear): 103945601
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Entry
103945601 CDS
T03446
Name
(RefSeq) transcription initiation factor IIF subunit alpha
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103945601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pxb03021
]
103945601
Transcription machinery [BR:
pxb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
103945601
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
DZR_2
DUF1258
ZnF_RZ-type
Zn_Ribbon_1
C1_1
Motif
Other DBs
NCBI-GeneID:
103945601
NCBI-ProteinID:
XP_009354504
LinkDB
All DBs
Position
Unknown
AA seq
546 aa
AA seq
DB search
MSTADLILRPECGGCKTTKDLYGSNCKHLTLCDDCGKKMALNRAKCNECGAVVTRLIREY
NVRASTVNDKNYFIGRFVTGLPSFSKTKNSENKWSLHKDGLQGRQLSDAMREKYKNKPWV
LEDESGRSQYQGHLEGAQTATYYLLIKHPSGKEYSANPAGSWFNFNKVAQYKQLTLEEAE
EKISNRKKTADGYERWMMKAANNGAALFGEVERFDNDNGVAGGKGRKKTAAGGDDEEGNG
SDRGDEDDEEELARNKRLNKRGGDGDGDDDDEGARGGDAEMDDDDIEKGDDWEHEEIFTD
DDEAVGNNPEEREDLEPEIPAPPEIKQDDEDEDEDDKEGGLSKSGKELKKLLGRSGGLND
SDVEDDDDDDDDMDDDIGFPSELAPKQKDAPKEEPSDNSPSKPTPSVSSRGTTSTSKSSK
GKRKSSGDDAKASNSAPPKKVKTENEQKSIKEEPVSVPASKSSAPPKGTPPVKTEPSSSG
GRVTEEEIRAVLMQRTPLTTNDLVSRFKGRLKSSEEKAAFSSILRRISKIKKGNNGTSSF
IVLKER
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacggccgatttgatactgagacctgagtgtggcggatgtaaaacgaccaaggac
ttatacggaagcaattgcaagcacttgactctgtgcgacgactgtggcaaaaaaatggct
ctcaaccgcgccaagtgcaacgagtgcggcgccgtcgtcactcgcttaattcgagaatat
aatgttcgagcgagtactgtcaatgacaagaactacttcattgggagatttgtgacgggg
ttgccgagtttttcgaagacgaagaattctgaaaataaatggtctctccacaaggatgga
ctgcaaggacgtcaacttagtgatgctatgcgggagaagtacaagaataaaccctgggtt
ttggaggacgaaagtggccggtctcagtaccagggtcatcttgaaggtgcacagactgca
acctactacttgctaataaagcatccctctggaaaggagtattctgcaaatcctgctggt
tcttggttcaatttcaacaaggttgcacagtacaaacaacttacattggaggaagccgaa
gagaagattagtaataggaaaaagaccgcagatggatatgaaagatggatgatgaaagct
gcaaataatggagctgctttatttggtgaagtggagaggtttgacaacgataatggtgtg
gctggtgggaagggacgaaaaaagacagctgctggtggtgatgatgaagaaggaaatggt
tcagatagaggagatgaggatgatgaagaagagttggcaaggaacaaaagattgaacaaa
agaggtggtgacggtgatggtgatgatgatgatgaaggcgcaaggggaggtgatgcggag
atggatgacgatgatatcgagaagggtgatgactgggagcacgaagaaattttcactgat
gatgatgaagctgttggcaacaatcctgaggaaagggaagatttggaaccagagattcca
gctcctccagaaattaagcaggatgatgaggacgaggatgaagatgacaaagagggtgga
ctgagcaaatcaggaaaagagttgaagaagctacttgggcgaagtggtgggctgaatgat
tcagatgtggaggatgacgacgacgacgatgatgatatggatgatgatattggctttcct
tcagagctggctccaaagcagaaggatgcacccaaagaggaaccatctgacaacagtccc
tcaaaaccaacaccttctgtgtccagtcgaggaactacatcaacctccaagtcctcaaag
ggaaagagaaaatcaagtggcgatgatgctaaggcatctaacagtgcacctcccaagaag
gtcaagactgaaaatgaacaaaaatccatcaaagaggagcctgtgtctgtacctgcttct
aaaagtagtgcgcctccaaaaggtactccgccggtgaaaacggagccatcatcatctggt
ggacgcgtcaccgaggaagaaatcagggccgtgttgatgcagagaacaccacttaccacg
aatgatcttgtttctagatttaagggaagactcaaatcgtctgaggaaaaggctgctttt
tcgagtattctaaggagaatttctaagataaagaagggcaacaacggaaccagcagcttt
atagtactgaaagaacgatga
DBGET
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