Pyrus x bretschneideri (Chinese white pear): 103946123
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Entry
103946123 CDS
T03446
Name
(RefSeq) CAR1 transcription factor isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103946123
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pxb03021
]
103946123
03019 Messenger RNA biogenesis [BR:
pxb03019
]
103946123
Transcription machinery [BR:
pxb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103946123
Messenger RNA biogenesis [BR:
pxb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
103946123
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUFIP1
Motif
Other DBs
NCBI-GeneID:
103946123
NCBI-ProteinID:
XP_009355029
LinkDB
All DBs
Position
Unknown
AA seq
567 aa
AA seq
DB search
MLPHYNSFPRHSNQAHTTGISAPPPHQMQPQLGIRNPQIPVQFSTNNSMIAQPNFMNLPN
NLLPMQNNHLGRPQFGSVGPTSQPGQPNVGFFGSQSNGQGMNSVGQFCNLVQQVNQLMSS
QVPGQIFGHNMLNLQQQMNPNMGLPYGQFCLPNSMQNMNQFVPMQLQNPSQVRPNYAFPG
SNQPPRATMSQNVPLFANNQANLHSNQAGQQANQNQQNLGLPPVQGTQLLQGNNSNSNGG
YNSNSNWKQSPSRNFAKNQKNHQGGFQNPQSHHMKNAKGKFTFRNGHKGKGLRNESEGKF
ALANSSNQGKQGKRSLSLSYTEQEIERWREERRKHYPSKSNIEKKISEKMINSEVIEREA
NIRREQLKDILTKQAELGVEVAEVPSYYLADSNQGHVKEDNESLTKKGRLANKFGKREKY
DRRDRFSKRQRSHQKDSSNNPSFNKREPTLLQKLLSAEIRRDRSHLLQVFRFMVTNSFFK
DCPDKPLKFPTVAVKESAGEEEVAEKLSSLAEKDALKGSDKSMVGRVYNNHSGNNNDVGN
YDDSGDEDDGEGEGTETPGEEEEEIIN
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgttacctcactacaattcctttcctcgccattccaaccaagctcacacgacgggtatc
tcggctccacctcctcaccagatgcaacctcaattgggtatcaggaatccccaaattcca
gtccaatttagtactaataattccatgatagctcaacccaatttcatgaatctaccaaac
aatcttcttcctatgcaaaataaccatctgggtaggcctcagttcggttccgttggccct
acatctcaaccgggtcagccgaatgttgggttttttggttcgcaaagtaacgggcaaggt
atgaactcggttgggcaattttgcaatttggtgcagcaagtgaatcaattgatgtcatct
caagtgcctgggcagatatttgggcataacatgttaaatttacagcaacagatgaacccg
aatatgggtttaccgtatgggcagttttgtttgccgaattcaatgcaaaacatgaatcaa
tttgtgccaatgcaattgcaaaatccatcgcaagtccgtcctaattatgcttttccggga
tcaaatcaaccacctcgggccacaatgtctcaaaatgtcccattgtttgcaaataaccag
gctaatctgcattctaatcaggcaggccagcaagctaaccagaatcagcaaaacttgggt
ctacctccagtgcaagggacacagcttctgcagggaaataattcaaacagtaatggtggt
tacaattcaaattccaattggaaacaatcaccaagcagaaactttgcaaaaaatcagaag
aatcaccaagggggatttcagaatcctcagtcacatcatatgaaaaatgcaaagggaaag
ttcacttttcgtaatgggcacaaaggaaaagggttaagaaatgagagcgaaggaaagttt
gctctggccaactcttcaaaccagggcaagcaagggaagagatctctttccttgtcatat
acggaacaagagattgagcggtggcgtgaagaacgtaggaagcactatccatcaaaatcc
aacatagagaagaagataagtgaaaagatgataaattcagaggtcattgaaagagaggcc
aacattcgacgagagcaactcaaggatattcttacaaagcaggctgagttgggagtcgaa
gttgctgaagtaccatcatactacctcgcagattcaaatcaagggcatgtaaaagaagat
aatgaatcattgaccaagaaggggagactagcaaacaaatttggtaagagagaaaaatat
gatagaagggatcggttttcgaagaggcaaagatcacatcaaaaggattcatctaataac
ccttctttcaacaagagggagccaaccttgctgcagaagcttcttagtgcagaaattagg
agagacagaagccacctcctgcaggtgtttaggttcatggtaacaaactctttcttcaaa
gattgtcctgacaaacctttgaaatttcctactgtagcagttaaagaaagcgcgggtgag
gaagaggtggctgaaaagttgtcctcacttgcagagaaggatgctttaaagggaagcgat
aaatccatggttggaagagtttataacaatcattctggaaataacaacgatgtcgggaat
tatgatgatagtggtgatgaagatgatggtgaaggagagggaacagagacacctggggag
gaagaggaagaaatcataaactag
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