Pyrus x bretschneideri (Chinese white pear): 103946125
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Entry
103946125 CDS
T03446
Name
(RefSeq) vacuolar protein sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103946125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pxb04131
]
103946125
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pxb04147
]
103946125
Membrane trafficking [BR:
pxb04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
103946125
Exosome [BR:
pxb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103946125
Exosomal proteins of colorectal cancer cells
103946125
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
103946125
NCBI-ProteinID:
XP_009355034
LinkDB
All DBs
Position
Unknown
AA seq
446 aa
AA seq
DB search
MAGNCLQAVELTTSGRPVLLPTEIECSLLSAVDLECEDLPNFPHLKSGLLILTTHRLLWL
PDSTTTIPTASSSASAIPLAAITHIFAAKKSIKSMFHSPRLRFQLSVSPEGRVPDSGSGS
RSVVVTVVVRGKSDLDAFLSKFWESWRGRAWEIGDEQGSSDAVSGSASASASSSGLYTRE
GTVRMVGVSGILRKEQEMWESTDKSLQDAFQDLNALMSKAKEMVMLAEKMRQKLLSGSQP
NDEELGSKQEMQDWMLSVGIISPVTKESAGAQYHQQLSRQLADFVRLPLERAGGMMNLID
IYCLFNRARGTELISPEDLLQACSLWEKFDVPVMLRKFDSGVMVIQNKSHSDEEVFARIK
TLVMKPDALRTGISASDAAITLGIAPGMAKEHLLTAESKGLLCRDISPDGFRFYINLFPE
IDPNDLYLVKDYGIYHTWLRAASASG
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggccggaaactgcctgcaagcggtggagcttactacgagcggccgcccagtcctcctc
ccaactgagatcgaatgttccctcctctccgctgtagacctcgaatgcgaagacctcccc
aacttccctcacctcaaatcgggtctcctcattctcaccacccaccgcctgttatggctt
cccgactccaccaccacaatacccaccgcctcttcttcagcctcggccatccctctcgcc
gccatcacccacatctttgccgccaaaaagtcaatcaagtccatgttccactcgccccga
ctcagattccagctctcggtttcgcccgaaggccgggttccggattccggctcgggttcg
aggtcggtggttgtgacggtggtggtgagggggaagagcgatttggacgcgtttttgagc
aaattttgggagagctggcggggtagagcctgggagattggggatgagcagggcagctcc
gatgcggtttcgggttcggcttcggcttcggcgtccagttccgggttgtatacgagggaa
gggacggtgaggatggttggagtttcggggatattgaggaaagaacaggagatgtgggag
agtactgataagagcttgcaggacgctttccaggacttgaatgctctcatgagtaaggct
aaagagatggtgatgctagcagaaaaaatgaggcagaagcttttatccggctcgcagcca
aatgatgaggaattgggttccaaacaagagatgcaagattggatgctcagtgttggtatt
atatcgcccgttactaaggagtctgcgggtgctcagtatcaccaacaattgtcccgtcag
ttagcagattttgtcagacttccacttgagagggctggaggaatgatgaatcttatagac
atctactgtctcttcaatcgtgctcgaggcacagaactgatctcgcctgaggatttgttg
caagcatgttctctctgggagaagtttgacgtcccagtaatgcttcgaaagtttgatagt
ggagtcatggtcatccagaataagtcccacagtgacgaagaggtttttgctagaatcaag
acccttgtaatgaagcctgatgctcttcgaactgggataagtgctagtgatgctgcaatt
acattaggtattgcaccaggcatggccaaggagcatcttcttactgctgaaagcaaaggt
ttgctgtgcagagatataagccctgatgggtttcgcttttatatcaacctgtttcctgaa
atcgatccaaatgacttgtacctagtgaaagactatggaatctatcacacatggttgagg
gcggcgtctgcttctggatga
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