Pyrus x bretschneideri (Chinese white pear): 103946324
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Entry
103946324 CDS
T03446
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-I-like
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103946324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pxb03021
]
103946324
03019 Messenger RNA biogenesis [BR:
pxb03019
]
103946324
Transcription machinery [BR:
pxb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103946324
Messenger RNA biogenesis [BR:
pxb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
103946324
U7-dependent histone pre-mRNA processing factors
103946324
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
DUF4592
Motif
Other DBs
NCBI-GeneID:
103946324
NCBI-ProteinID:
XP_009355263
LinkDB
All DBs
Position
Unknown
AA seq
696 aa
AA seq
DB search
MASMGQPPPPPPLKRREAPAASREDDKMIITPLGAGNEVGRSCVHMTFKGKTVMFDCGIH
PAYSGMAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYK
LLLTDYIKVSKVSVEDMLFDEQDINSSMDKIEVIDFHQTVEVEGIRFWCYTAGHVLGAAM
FMVDIAGVRVLYTGDYSREEDRHLRAAETPEFSPDVCIIESTYGVQHHQPRHIREKRFTD
VIHTTVAQGGRVLIPVFALGRAQELLLILDEYWSNHPELHNIPIYYASPLAKRCLSVYET
YTLSMNDRIRNAKSNPFIFKHISPLKSIENLKDVGPSVVMASPGGLQSGLSRQLFDKWCT
DKKNSCVIPGYVVEGTLAKTIINEPKEVTSMTGLSVPLNMQVHYISFSAHADSVQTSAFL
EELRPPNIILVHGEANEMGRLKQKLVTQFADRNTKILTPKNCQSVEMYFNSQKMAKAIGR
LAEKTPEVGESVSGLLVKKGFSYQIMASDDLHVFSQLSTANVTQRITIPYASGFTVIKHR
LKQIYESVESSVDEESGVPTLRVHDRVTLKQDTDKHISLHWASDPISDMVSDSVVALILN
INREVPKVVVESEDIKTEEENVKKAEKVIHALLVSLFGDVKPGENGKLVISVDGNVAQLD
KQSGDVESENEGLKERVKTAFRRIQSAVKPIPLRAT
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaatgggacaacccccgccgccgccgcctcttaagaggcgggaggctcctgca
gcatcaagagaagatgataaaatgatcattactccactcggtgctggcaatgaagtcggc
cgctcttgcgtgcacatgaccttcaaggggaaaactgtcatgtttgattgtggaattcac
cctgcttattcgggcatggctgccttgccatactttgatgagattgatccttccacaatt
gatgtcctcctcgtaacccactttcacttggatcatgctgcatccctaccttactttctt
gagaagaccacattcaaaggccgcgtttttatgacttatgctacaaaggctatctacaag
ttgcttttgacggattatataaaagtgagcaaagtttcagttgaagatatgttgtttgat
gagcaagacataaattcctcgatggataaaattgaggttattgatttccatcagacggta
gaggttgagggcattcgattttggtgctacactgccggtcatgtccttggtgctgccatg
tttatggttgatatagctggtgttagagttctatatactggagattattcacgtgaagaa
gaccggcatctccgtgctgctgagaccccagagttctcccctgatgtgtgcattattgaa
tccacttatggtgtccagcaccatcaacctcggcacatccgtgagaagcggttcactgat
gttatccacacaactgtcgctcaagggggtcgtgtcttgattcctgtatttgcacttggt
cgtgcccaagaacttctcctgatccttgatgagtattggtcaaaccatcctgaactccac
aatattcctatttattatgcttccccacttgccaaaagatgtttgtctgtatatgagaca
tacaccctttctatgaacgataggatccgcaatgcaaagtcaaatcctttcattttcaag
cacatatcaccactcaagagcattgagaatctcaaggatgtaggtccatcggtggtgatg
gcaagccctggtggtcttcagagtggactgtcaaggcagctcttcgataaatggtgcact
gataagaaaaattcatgtgttattccaggttatgtggtagaagggactctagccaaaacc
atcatcaatgaaccaaaagaggtaactagtatgactggactctcggtacctctcaacatg
caggtgcattacatttcattctctgcccacgcagactctgttcagactagtgcatttttg
gaagagctgaggcctcctaacataatcctagttcatggagaagctaatgagatgggaagg
ctaaaacagaagctcgtgacccagtttgctgatcggaacaccaaaatcctgaccccaaag
aattgtcagtctgttgaaatgtattttaactcccagaaaatggcaaaagctattggaagg
cttgctgagaagacccctgaagtgggtgaaagtgtcagcggtttactggtaaaaaaaggc
ttcagttatcaaataatggcttccgatgatcttcatgtcttctcacagctgtccacagca
aatgtcactcaacggattactattccatatgctagtggcttcactgtgataaagcatcgg
cttaagcaaatatacgagagtgtagagtcttcagtggatgaggaatctggagtgccaaca
ctgcgagtgcatgatcgggtgactttgaagcaggatacagataaacacatatcactgcat
tgggcgtcggatcctataagtgacatggtgtcagactcggttgttgcccttattctgaat
atcaatcgagaagtccccaaggtagttgttgaatcagaggatataaaaactgaggaagag
aatgtgaagaaggcggaaaaggttatccatgcacttcttgtttcactctttggcgacgtg
aagcctggagaaaacgggaaactagtgattagtgttgatgggaatgtggcgcagcttgat
aaacagagcggggatgtagagagtgaaaacgaaggtctcaaggaaagagtaaaaacagca
tttcgtcgaatccaaagtgcggtgaagccaatccctctccgtgcaacttag
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integrated database retrieval system
