KEGG   Pyrus x bretschneideri (Chinese white pear): 103946839
Entry
103946839         CDS       T03446                                 
Name
(RefSeq) sm-like protein LSM8
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
pxb  Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03018  RNA degradation
pxb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pxb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103946839
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103946839
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pxb03019]
    103946839
   03041 Spliceosome [BR:pxb03041]
    103946839
Messenger RNA biogenesis [BR:pxb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     103946839
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     103946839
Spliceosome [BR:pxb03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    103946839
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 103946839
NCBI-ProteinID: XP_009355908
LinkDB
Position
Unknown
AA seq 98 aa
MSSGPGLESLVDQTISVITNDGRNIVGVLKGFDQSTNIILDESHERVFSTKEGVQQLVLG
LYIIRGDNISIVGELDADLDSTVEWSKMRAYPLKPVIH
NT seq 297 nt   +upstreamnt  +downstreamnt
atgtccagtggccctggtcttgagtcactcgttgatcaaacaatttcagttatcacaaat
gatggacggaatattgtgggagtcttgaaaggttttgaccagtctactaatattattctt
gatgaatctcatgaacgtgttttttctacaaaggagggtgttcagcaactcgtgttgggg
ttgtatataatcagaggtgacaacataagcattgttggggaattagatgcagatcttgat
tctactgttgagtggtcgaagatgagagcttatcccctcaagcctgtcatccactga

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