Pyrus x bretschneideri (Chinese white pear): 103947738
Help
Entry
103947738 CDS
T03446
Name
(RefSeq) syndetin-like isoform X1
KO
K23288
syndetin
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pxb04131
]
103947738
Membrane trafficking [BR:
pxb04131
]
Protein recycling
Others
EARP complex
103947738
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
TetR_C_30
Motif
Other DBs
NCBI-GeneID:
103947738
NCBI-ProteinID:
XP_009356960
LinkDB
All DBs
Position
Unknown
AA seq
1114 aa
AA seq
DB search
MQPNLSPFGSVLANPFLFNGDLSEGIETPGVLFLVPFLLFQGGAMDLSKVGEKILSSVRS
ARSLGLLPSASDRPEVPARAAAAAAVARAIAGLPPHQRFSLSSSSEELSSIYGSKHHGQE
VEEIEEEFYEENFDPVRHILEHIPSEESELAYFERQAALRLAQLDRVAECLSRKVMEHHE
VMVKGMHLVRELEKDLKIANVICMNGRRHLTSSRNEVSRDLIVNSNSKKKQALLDMLPVL
TELGHALKMQAELESLVEEGNYCKAFQVLSEYLQLLDTFSDLSAVQEMSRAVEVWLGKTL
QKLDSLLLGVCQEFNEEGFITVVDAYALIGDISGLAEKLQSFFMQEVLSETHSILKNIVQ
EEDQGFHIQNSRLTYSDLCLQIPEPKFRQCLLNTLAILFKLMCSYHEIMGFQLDNRDSAG
KTPSMTQKESDISPTLGGVQQISPPCSSQKVNGSLAESVDIVHGSAYIDESTTTRSLVEP
AGNTTSTNYQNLVDEASKDDSTTSTSGSPWYQLRKDATAFISQTLQRGRKNLWQLTATRV
SVLLSSASVSSASIHQFLKNYEDLGVFILAGEAFCGIEAADFRQKLKAVCENYFLAFHRQ
NIHALKMVLEREIWLIMPPDAVQEITFPGLAGDGAPIIVPSEGKSNARVLHSDKSTRVVD
TGAKKNGFSNWLRNGNPFLLKLTHTSKEGLKWNSTTGESDGNFSERLGDKVSQQNSDSSH
SDGANSVSEEDNEDLLADFIDEDSQLPSRILKPRLSRNQSLHYNDGEIIAQTGSSICLLR
SMDKYARLMQKLEIVNVEFFKGICQLFEVFFHFVFETFAQQNNNSGGKGSPDPINYRLKT
ALSRIQQDCDQWIKSPSSSSTSLNSSYTDITPMSPPSNTPGTSFGLKERCAGADTISLVA
RILHRSKAHLKTMLLQNNAAVVEDFYAHLVDAVPDLVEHIHRTSARQLLHINGYVDRIAN
AKWEVKELGLEHNGYVDLLLGEFKHYKTRLAHGGIRKEVQDLLLEHGLEIVAQTLIEGLS
RVKRCTDEGRALMSLDLQVLINGLQHFVAMNVKPHLQIVEAFIKAYYLPETEYVHWARAH
PEYTKNQIVGLINLVATMKSWKRKTRLEVLEKIE
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgaatctgtctccctttggcagcgttttggcgaatccgtttttattcaatggc
gatttgagcgagggcattgagacccctggggttttgttcttggtcccctttttgcttttc
cagggtggtgcaatggatttatcaaaggtcggcgagaagattctgagctccgttaggtct
gccagatcgctcggccttctcccctctgcttctgatcgaccagaggttcctgcgcgagct
gcggctgctgcagctgttgctcgtgctattgctggactgcctccgcatcaaaggtttagt
ctatcatcaagctctgaagaattgagctcaatatatggaagcaaacatcatggtcaagaa
gtagaggagatagaggaagaattctatgaagagaattttgatccagtcagacatattttg
gagcatattccatctgaagaaagtgagctggcttattttgagagacaggccgctcttaga
ttggcacaactggatagagtagctgaatgtttatcccgcaaggttatggaacatcatgaa
gtaatggtgaaggggatgcatttggtcagggaattggagaaagacttgaaaattgcaaat
gtcatctgcatgaatggaaggcggcatctgacctcatcaaggaatgaggtttctagggat
ctcattgtaaattccaattccaaaaagaaacaagctcttctggacatgcttcctgtttta
actgagcttggtcatgcactgaaaatgcaagcagagctcgagtctctggttgaggaagga
aattactgcaaggcctttcaagtcctgtctgaatatctacagctgttagatactttttca
gatctttctgcagtacaagagatgagccgtgctgtagaggtttggcttggaaaaactctt
caaaagctggactccttgttgctaggagtgtgccaggagttcaatgaggagggctttata
actgtggtcgatgcttatgcactaattggggatatctctggccttgctgagaagttacaa
agtttctttatgcaggaagttctgtcagaaacccactctatattgaagaatattgtgcaa
gaggaggatcagggatttcacatacaaaatagtcgacttacctacagcgatctatgcctt
cagatacctgaaccaaagtttaggcagtgtttgttaaacacactagcaatcctattcaag
ttgatgtgttcatatcatgaaatcatgggctttcagctggataatagggattcagccggt
aaaactccaagcatgacacagaaggaaagtgacatctctccgactcttgggggggttcag
caaatttcacctccttgttcttcccaaaaagttaatggctctctcgccgaatctgtagat
atagtgcatggttcagcgtacatagatgaatctacaaccacccgctctttggttgaacct
gcaggaaacacaacttccactaattatcaaaatttagttgatgaggcgagtaaggatgac
agtacaacatcaacaagtggatccccttggtatcaactacgaaaagatgccacagcattt
atttcacaaacccttcagaggggacgcaaaaatctttggcaactcacagctactcgtgta
tcggtcttgctttcttcggcttctgtttcttctgctagcatacaccaattcttgaaaaac
tatgaagatctgggtgtctttatcttggctggggaagcattttgcggaattgaagcagct
gacttcaggcagaagttgaaggcagtatgtgaaaattattttttagcttttcatcggcag
aatatacatgcgcttaaaatggtgttggaaagagaaatttggttgataatgccaccggat
gcagtacaagaaattacatttcccgggcttgctggtgatggagcacctataattgttcca
tctgagggtaagtctaatgccagggttctacattctgataagtctacaagagttgttgat
actggtgccaagaagaatggattctctaattggcttagaaatggaaacccctttttgtta
aagctgacacatacatccaaagaaggtcttaagtggaacagtacaactggtgaatctgat
ggtaattttagcgaaaggcttggtgataaggtctctcaacaaaacagtgattcaagtcat
tctgatggtgctaattctgtttcggaagaagataatgaagatcttcttgcagactttatt
gatgaggatagtcaactcccaagtcgaattttgaaacctagactgtcaagaaatcaatct
ttacattataatgatggagaaatcatagctcaaactggatcatctatttgtcttctaagg
tcaatggataaatatgccaggcttatgcagaaattggaaatagtcaacgttgagttcttc
aagggaatatgccagttgtttgaggtattttttcattttgtgtttgaaacatttgctcag
caaaacaacaattcaggtggaaaagggtcacctgatccgattaactatcggctgaagaca
gccttgtccagaatacaacaagactgtgaccagtggataaagtccccatcatcttcatcc
acatctctaaattcgtcatatacagacatcacacctatgagtcctcccagtaacacacca
ggaacatcctttggtctcaaggaaagatgcgctggtgctgacactatctcccttgttgct
cgaatattgcatagatctaaagctcatctcaagacaatgctacttcagaataatgctgct
gtggttgaagacttctatgcacatctggttgatgctgtaccagatcttgtagagcacatt
cataggacaagtgcaagacaactgctccatattaatggttatgtggatcggatagccaat
gcaaaatgggaagtgaaagagcttggactagagcataatgggtatgttgatttgttattg
ggagaattcaagcactataaaacaaggcttgctcatgggggaattcgcaaggaggttcaa
gaccttctcttagaacacggacttgaaattgtggcccaaactctcatagaaggactctcc
cgtgtcaagaggtgtacagatgaagggcgggctctcatgtcattggatctacaggttttg
atcaatggcttgcagcattttgtcgcaatgaacgtgaagccccatttacaaatagttgaa
gccttcatcaaggcatactatcttccggaaactgaatatgtacactgggcacgtgctcac
ccggaatacacaaaaaatcaaattgttgggttgatcaaccttgttgccactatgaaaagt
tggaagagaaaaaccagactggaagtgctagaaaagattgaatga
DBGET
integrated database retrieval system
