KEGG   Pyrus x bretschneideri (Chinese white pear): 103947996
Entry
103947996         CDS       T03446                                 
Name
(RefSeq) elongator complex protein 2-like
  KO
K11374  elongator complex protein 2
Organism
pxb  Pyrus x bretschneideri (Chinese white pear)
Brite
KEGG Orthology (KO) [BR:pxb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pxb03016]
    103947996
Transfer RNA biogenesis [BR:pxb03016]
 Eukaryotic type
  tRNA modification factors
   Elongator complex
    103947996
SSDB
Motif
Pfam: WD40 Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd WDR55 Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd EIF3I ANAPC4_WD40 Beta-prop_Aladin NBCH_WD40 Beta-prop_HPS5 WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_WDR35_TULP_N WDR90_beta-prop_4th Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_ELP1_2nd Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 103947996
NCBI-ProteinID: XP_009357260
LinkDB
Position
Unknown
AA seq 842 aa
MSSGDDRGGGRGVGVKGVFIGAGCNRIVNNVSWGACDLVAFGAQNAVAIFNPKTAQIWTT
LPGHKAAVNCTQWLPSNKFAFRAKHLDWHYLLSGDAAGAIILWECSVLEGKWRYVQQLPQ
LHKKGVTCITGIMVSQTEAVFASTSSDSTVYIWEVVFPSTSGGDCELLHLDSLSVGTKPM
VALSLSELPGSTGHLVLAMGGLDNKIHLYSGERRGKFVRGCELKGHTDWIRSLDFALPTC
TNGEASNVLLVSSSQDRGIRIWKMALKEPLDSNQSAYRKEKVSLASYIEGPVLIAGTTSY
QISLESLLIGHEDWVYSVEWQPPSNASSEGIAYCQPQSILSASMDKTMMIWKPEKTSGIW
MNVVTVGELSHCALGFYGGHWSPNGDSILAHGYGGSFHLWKNVGTDYENWQPQKVPSGHF
AAITDIAWGRSGQYLLSVSHDQTTRIFAPWQNEASPRDKESWHEIARPQVHGHDINCVAI
IQGKGNHRFVSGADEKVARVFEAPLSFLKTLGHAISQTSNFSDDSQVSVQILGANMSALG
LSQKPIYVHAEQHTPDKNVNDGLDTFETIPDAVPVVLTEPPIEDQLAWHTLWPESHKLYG
HGNELFALCSDHDGKFVASSCKAQSAAVAEIWLWQIGSWKAVGRLQSHTLTVTQMEFSHD
DKFLLAVSRDRQFSVFSIDKAGTDEITYQLIAKQEAHKRIIWACSWNPYGYEFATGSRDK
TVKIWTVENESSVKLLATLPLFSSSVMALSWVGVDCKSNEGLLAVGMENGLIELWNLSVK
RSDDGVAGAVASLVVRLEPLMCHVSAVNRLAWRNCKNEDSGSLQLASCGVDQCVRVFEVN
IN
NT seq 2529 nt   +upstreamnt  +downstreamnt
atgtctagcggagatgatcgagggggagggcgtggggttggagtgaagggagtgttcata
ggagcaggctgcaacagaatcgtcaacaacgtctcgtggggtgcttgtgatttagtcgct
ttcggtgcccaaaacgccgttgctatcttcaatcccaagactgcccaaatttggactacg
cttccaggtcacaaggctgctgtgaattgcacgcagtggctcccaagtaacaagtttgca
ttcagagctaaacacttggactggcattatttgctctctggagatgctgctggtgcaatt
attttgtgggagtgctctgttcttgaaggaaagtggaggtatgtgcaacaactacctcag
ttgcacaagaagggtgtcacatgcataactggaattatggtttctcaaactgaggcagtc
tttgcctctacgtcttccgatagtacggtttatatatgggaggttgtgtttccatcaact
agtggaggtgactgtgaactgttgcatctggattctctctctgttggtacaaaacccatg
gtagcgctatcgttatcagagttgcctggaagtactgggcacttagtcctggcaatggga
ggactggataacaaaattcacctttacagtggggagaggagaggaaagtttgttcgaggg
tgcgaattgaaggggcatacagattggatcagaagtctggatttcgcattacctacgtgc
accaatggcgaggcaagcaatgtactacttgttagttcatctcaagacagaggcatacgc
atatggaagatggctttaaaggagcctttggacagcaaccagagtgcttaccggaaagaa
aaagtaagcttagcatcttatattgaaggccctgtacttatagctggcacaacgtcatat
cagatatcattggaatctcttctaattggacatgaggattgggtgtattcagtggagtgg
caacccccgtcaaatgcatcttctgaagggattgcctactgtcaaccccaaagcatctta
tctgcatctatggacaagacaatgatgatatggaaacccgaaaagacatctggtatctgg
atgaatgttgttaccgttggagaattaagtcattgtgctctagggttttatggtggccac
tggagccctaatggagattcaatattagcacatggatatggtggatctttccatctctgg
aaaaatgtcggcactgactatgaaaattggcaaccacaaaaggttccatctgggcatttt
gcagcaataacagatattgcatggggaagatctggtcaatacttgctgtcagtcagtcat
gatcagacaactcgaatttttgctccttggcaaaatgaggcgtctcctagagacaaggag
tcttggcatgaaattgctcgacctcaagttcatggtcatgatattaactgtgtggccatc
atccaaggaaaggggaaccatcgatttgtcagcggagctgatgagaaagttgccagagtg
tttgaagctccattgtctttcttgaagacattgggtcatgccatttcacaaacatctaac
ttttcagatgattcccaagtaagtgttcagattttgggtgcaaatatgtctgctcttggg
ctatcacagaaacctatttatgttcatgctgagcagcataccccagacaagaatgtgaat
gatggcctcgacacatttgaaaccattcctgatgctgttccagttgtgttgactgaacct
cccattgaagatcaactggcatggcatacactatggccagaatcacacaaactttacggt
cacgggaatgagctgtttgctctgtgcagtgatcatgacgggaagtttgttgcttcttca
tgtaaggcccaatcagcagcggtagcagaaatatggctatggcaaattggttcatggaaa
gcagttggtcgcttgcagtctcatactttgacagtgacacaaatggaattctctcatgat
gacaaattcctgttggctgtgtcaagggatcgccagttctctgtattttcaatcgataaa
gcaggcaccgatgaaattacttaccagctcatagcaaagcaggaggcacacaaaagaatt
atatgggcatgctcttggaatccatacgggtacgaatttgccacaggctcgagggataag
acagtgaagatctggactgtggaaaatgagtcttcagtgaagctgcttgcgactcttccc
ctgttcagtagtagcgtcatggccttatcttgggtcggtgttgattgcaagagcaacgaa
gggctcctcgcagttggaatggaaaacggactcattgaactgtggaatctatctgttaaa
agatctgatgatggagtagcaggcgcagttgcttcccttgtcgtacggcttgagccgttg
atgtgccatgtctctgctgtaaaccgtttggcgtggagaaactgcaagaatgaagattcc
ggtagcttacagctcgcttcttgcggggtagatcaatgtgtgagagtgttcgaggttaac
attaactga

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