Pyrus x bretschneideri (Chinese white pear): 103948257
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Entry
103948257 CDS
T03446
Name
(RefSeq) transcription initiation factor IIF subunit alpha-like
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103948257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pxb03021
]
103948257
Transcription machinery [BR:
pxb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
103948257
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
DZR_2
ZnF_RZ-type
DUF1258
C1_1
Zn_Ribbon_1
Motif
Other DBs
NCBI-GeneID:
103948257
NCBI-ProteinID:
XP_009357545
LinkDB
All DBs
Position
Unknown
AA seq
546 aa
AA seq
DB search
MSTTDLILRPECGGCKTTKDLYGSNCKHLTLCDDCGKKMALNRAKCNECGAVVTRLIREY
NVRASTANDKNYFIGRFVTGLPCFSKNKNFENKWSLHKDGLQGRQLSDAMREKYKNKPWV
LEDESGRSQYQGHLEGAQTATYYLLIKHPSGKEFSAIPAGSWFNFNKVAQYKQLTLEEAE
EKISNRKKTADGYERWMMKAANNGAALFGEVERLDKDNGGAGGKGRRKTAGGDDDEEGNG
SDRGDEDEDEELERKKRLNKRGGDGGDGDDDNEGVGGGDVDMDDDDIEKGDDWEHEEIFT
DDDEAVGNNPEEREDLEPEIPAPPEIKQDDEDEDEDDKEGGLSKSGKELKKLLGRSGGLN
DSDVEDDDDDDDDLDDDIGFPPALAPKQKDAPKEEPSDNSPSKPTPSASSRGTTPTSKPS
KGKRKLSGDDSKATNSAPPKKVKTENEQKSIKEEPVSVSASKSSAPPKVTPPVKTEPSSS
GGRVTEEEIRAVLMQRTPLTTNDLVSKFKGRLKSSEEKTAFSNILRRISKIKKGNGTSSY
IVLKER
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgaccgatttaatactgagacctgagtgtggcggatgtaaaacgaccaaggat
ttatacggaagcaattgcaagcacttgactctgtgcgacgactgtggcaaaaaaatggct
ctcaaccgcgccaagtgcaacgagtgcggcgccgtcgtcactcgcttaattcgagagtat
aatgttcgagcgagtactgccaacgataagaactacttcattgggagatttgtgacgggg
ttgccgtgtttttcgaagaacaagaattttgaaaataaatggtctctccacaaggatgga
ctacaaggacgccaacttagtgatgccatgcgggagaagtacaagaacaaaccatgggtt
ttggaggacgaaagtggccggtctcagtaccagggtcatcttgaaggtgcacagactgca
acttactacttactaataaaacatccctctggaaaggagttttctgctattcctgctggt
tcttggttcaatttcaacaaggttgcgcaatacaagcaacttacattggaggaagccgaa
gagaagattagtaataggaaaaagactgcagatgggtatgaaagatggatgatgaaagct
gcaaataatggagctgctttatttggtgaagtagagaggcttgacaaggataatggtggg
gctggtgggaagggacgaagaaagacagctggtggtgatgatgatgaagaaggaaatggc
tcagatagaggggatgaggatgaggatgaagagttggaaaggaaaaaaagattgaataaa
agaggtggtgatggtggtgatggtgatgatgataatgaaggtgtagggggaggtgatgtg
gacatggatgatgatgatatcgagaagggtgatgactgggagcacgaagaaattttcact
gatgatgatgaagctgttggaaacaatcctgaggaaagggaagatttggaaccagagatt
ccagctcctccagaaattaagcaggatgatgaggacgaggatgaagatgacaaagagggt
ggactgagcaaatcaggaaaagagttgaagaagctacttgggcgaagtggtggactgaat
gattcagatgtagaggatgacgacgatgacgatgatgatctggatgatgatattggcttt
cctccagcgctggctccaaagcagaaggatgcacccaaagaggaaccatctgacaacagt
ccctcaaaaccaacaccttctgcgtccagtcgaggaactacaccaacctccaaaccctca
aagggaaagagaaaattaagtggcgatgattctaaggcaacgaacagtgcacctcccaag
aaggtcaagactgaaaatgaacaaaaatccatcaaagaggagcctgtgtctgtgtctgct
tctaaaagtagtgcgcctccaaaagttactccacccgtgaaaacggagccatcgtcatct
ggtggacgcgtcaccgaggaagaaatcagggctgtattgatgcagagaacaccactcacc
acaaatgatcttgtatctaaatttaagggaagactcaaatcttcagaggaaaagaccgct
ttttcgaatattctaaggagaatttcaaagataaagaaggggaacggaactagcagctat
atagtactgaaagagcgatga
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