Pyrus x bretschneideri (Chinese white pear): 103948361
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Entry
103948361 CDS
T03446
Name
(RefSeq) splicing factor 3B subunit 3-like
KO
K12830
splicing factor 3B subunit 3
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103948361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pxb03021
]
103948361
03041 Spliceosome [BR:
pxb03041
]
103948361
03036 Chromosome and associated proteins [BR:
pxb03036
]
103948361
Transcription machinery [BR:
pxb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
103948361
Spliceosome [BR:
pxb03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
103948361
Complex B
103948361
Complex C
U2 SnRNP specific factors
103948361
Chromosome and associated proteins [BR:
pxb03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
103948361
TFTC complex
103948361
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_EML_2
Beta-prop_BBS7
WDR55
Motif
Other DBs
NCBI-GeneID:
103948361
NCBI-ProteinID:
XP_009357649
LinkDB
All DBs
Position
Unknown
AA seq
1211 aa
AA seq
DB search
MYLYSLTLQRATGIVCAINGNFSGGKAQEIVVARGKVLDLLRPDENGKIQTLLSVEIFGA
IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKEKNVFDKIHQETFGKSGCRRIVPGQYL
AIDPKGRAVMVGACEKQKLVYVLNRDTSARLTISSPLEAHKSHTIVYSICGVDCGFDNPM
FAAIELDYAEADQDSTGQAANEAQKHLTFYELDLGLNHVSRKWSDQVDNGANMLVTVPGG
GDGPSGVLVCAENFVIYKNQDKPDLRAVIPRRVDLPAERGVLIVSAAMHKQKSMFFFLLQ
TEYGDIFKVTLDHDNDKVSELKIKYFDTIPVTTSMCVLKSGFLFAASEFGNHSLYQFQAI
GEEPDVESSSATLMETEEGFQPLFFQPRKLKNLVRIDQVESLMPIMDMKVNNLFEEETPQ
IFTLCGRGPRSSLRILRPGLAISEMAVSELPGVPSAVWTVKKNVSDEFDAYIVVSFANAT
LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKR
TIVKVGSNRLQVVIALSGGELIYFEVDTTGQLMEVEKHEMSGDVACLDISPVPEGRQRSR
FLAVGSYDSVIRILSLDPDDCMQILSVQSLSGVPESLLFLEVQASIGGEDGADHPANLFL
NAGLRSGILFRTVVDMVTGQLSDSRSRFLGLRAPKLFSISVRGKHAMLCLSSRPWLGYIH
QGHFLLTPLSYETLEYAASFSSDQCSEGVVSVAGNALRVFTIERLGETFNETVIPLRYTP
RKFIVQLKRKLLVIIESDQGAFTAEEREAAKKECFEAVGLGENGNGNVEQMENGGDEEDP
LSDEHYGYPKAESDKWVSCIRVLDPKTATTTCLLELQDSEAAFSICTVNFHDKEYGTLLA
VGTAKGLQFWPKKSVTAGYIHIYRFIDDGKSLELLHKTQVDGVPLALCQFQGRLLAGIGP
VLRLYDLGKKRLLRKCENKLFPSTIVSIQTYRDRIYVGDIQESFHYCKYRRDENQLYIFA
DDCVPRWLTASFHIDFDTMAGADKFGNVYFVRLPQDVSDEIEEDPTGGRIKWEQGRLNGA
PNKVEEIVQYHVGDVVSCLQKASLIPGGGECIIYGTVMGSLGSLLAFTSRDDVDFFSHLE
MYMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPMDLQRKIADELDRTPGEIL
KKLEEIRNKII
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgtacctctacagcctcactctccagcgcgccaccggcatagtctgcgccatcaacggc
aacttctccggcggcaaggcccaggagatcgtagtcgcccgcggcaaagttctcgacctt
ctccgccccgacgaaaatggtaagatccagactctcctctctgttgaaattttcggcgca
attaggtcgttagctcagtttaggctcactgggtctcagaaggactatattgttgtcggg
tccgattcgggtcggattgtgattcttgagtataataaggagaagaatgtgtttgataag
attcaccaggagactttcgggaaatcgggttgtcggaggatagttccgggtcagtatttg
gctattgatcctaagggtagggctgttatggttggggcatgtgagaagcagaagcttgtt
tacgttttgaatagggatacttctgctaggttgacaatttcgtcgcccttggaggcgcac
aagtcgcatacaattgtgtattcgatttgtggggttgattgtgggtttgataatcccatg
tttgctgccattgagttggattatgcggaagctgatcaggactctactgggcaggcggcg
aacgaggcgcagaagcatttgactttctatgagcttgatcttgggctcaatcacgtatcg
aggaagtggtcggatcaggttgataatggtgcaaatatgctggtcacggttcctggaggt
ggggatggtccaagcggtgtattggtctgtgcggaaaattttgtgatttataagaaccag
gataaaccggatctcagggctgtgattcctaggcgtgtggatttgcctgcagagcgtggg
gttcttatagtttcagcagctatgcacaagcagaagtcaatgttcttttttcttttgcag
acagagtatggagatatatttaaggttactctggatcatgataacgataaggtctcagaa
ttaaaaatcaagtattttgatacaattccagttacaacttcaatgtgtgtgttaaaatct
gggtttttgtttgctgcgtcagagtttgggaatcactctttgtaccagttccaggcaata
ggagaagagcctgacgtggagtcttcatcagctacattgatggaaacggaagaaggtttc
cagcctttgtttttccagcccagaaaacttaagaaccttgttaggattgatcaagttgag
agcttgatgccgataatggatatgaaggtcaataatctatttgaggaagaaacacctcaa
atatttacactttgtgggcggggtcctcgttcatccctcaggatattaagacctggttta
gctatcagtgagatggctgtgtcagagcttcctggtgtaccgagtgcagtctggactgtg
aagaagaatgtgtccgatgaatttgatgcatacattgtggtgtcatttgcaaatgctact
cttgtgctttcaattggtgagacagttgaagaagttagtgacagtgggtttcttgacact
accccatcgcttgcagtttctttgataggtgatgattctctaatgcaagtgcacccaaat
ggaattaggcatattagggaagatggacgtattaatgaatggagaactcctggaaagagg
acgattgtaaaggttggctctaatagacttcaagtagttattgcactgagtggaggagaa
cttatatattttgaggttgatacgacgggtcagttaatggaggtggagaagcatgaaatg
tctggagatgtagcttgtctagacatttccccggtacctgaagggaggcagagatctcgt
ttccttgcagttggttcatatgacagcgtcattcgtattttgtcattggatcctgatgac
tgtatgcaaattcttagtgtgcaaagtctttctggagttccagaatctctcctctttctt
gaggttcaggcctcaattggtggggaggatggtgctgatcatcctgctaaccttttcctt
aatgctggcttacgctccgggattttattcagaactgtggtggatatggtcacaggtcag
ctctctgattcccgttctcgattcttgggactaagagcaccaaagctattttctattagt
gtgagaggcaagcatgctatgctttgcttgtcaagtcggccctggcttggttatatccat
caaggacattttctcttaacaccactatcgtatgagacccttgaatatgctgcctcattt
tcatccgatcaatgttcggaaggtgtagtttctgttgctggaaatgctttgagggtattt
actattgaaagattgggagaaacatttaatgaaactgtgattccactgaggtatacccct
agaaagtttattgttcaactcaaacgaaagcttttggtaattattgaaagtgatcaagga
gcattcacagcagaagagcgtgaagctgcaaaaaaggagtgttttgaggctgtgggttta
ggtgaaaatggaaatggtaatgtagagcagatggaaaatggtggcgatgaggaggatccc
ttatctgatgagcactatgggtatcctaaggcagagtctgacaagtgggtgtcttgcatt
agagttcttgaccccaagacagcaactacaacatgtctgctggagcttcaggatagcgaa
gctgcattcagtatttgtacagtgaatttccatgacaaggagtatggtacacttttagct
gttggcactgcgaaaggactgcagttttggccaaaaaagagtgtaacagcaggctatatt
cacatatatagatttatagatgatggcaagtcccttgaacttttgcacaagacacaagtg
gatggtgttcctcttgccttgtgccagtttcaaggaaggttactagctgggattggacca
gtgctcagactctatgatttggggaagaaaaggttgctcaggaagtgtgagaataagctg
tttcccagcacaattgtatctatccagacctatcgcgatcggatttatgtaggtgacatt
caagagtcattccactactgcaagtataggcgggatgagaatcagttgtacatctttgct
gatgattgtgtaccaagatggcttacagcatccttccatatagattttgacaccatggca
ggtgcggacaagtttgggaatgtctattttgtgcggttaccacaggatgtttcagatgag
atagaagaagatccaacgggtgggaggataaaatgggagcagggaaggttgaatggcgct
cccaacaaagtagaggagatagtgcagtatcatgttggtgatgtcgtcagctgcttgcag
aaggcatctctaattccaggtggtggggagtgcatcatctatggaacagtgatgggtagc
ttgggttcattacttgcgttcacctcccgtgatgacgttgacttcttttctcacttggag
atgtatatgaggcaggagcatccacctttgtgtggtagagatcacatggcttatagatca
gcatatttcccagtcaaggatgtgattgatggagatctgtgtgagcagttcccaacattg
cccatggatctgcagagaaaaattgcggatgagttggatagaactcctggagagatactg
aagaaactcgaggaaattcgaaacaagatcatttaa
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integrated database retrieval system
