Pyrus x bretschneideri (Chinese white pear): 103948507
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Entry
103948507 CDS
T03446
Name
(RefSeq) protein STABILIZED1-like
KO
K12855
pre-mRNA-processing factor 6
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103948507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pxb03041
]
103948507
Spliceosome [BR:
pxb03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
103948507
Complex C
U5 SnRNP specific factors
103948507
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP1_N
TPR_14
HAT_PRP39_N
TPR_19
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_16
TPR_CcmH_CycH
TPR_17
TPR_8
TPR_2
ubiquitin
ARM_TT21_N
TPR_1
IgD_del_linker
Motif
Other DBs
NCBI-GeneID:
103948507
NCBI-ProteinID:
XP_009357821
LinkDB
All DBs
Position
Unknown
AA seq
1026 aa
AA seq
DB search
MVFITSPNHKTLTLNLNPKTTTLQALKLQIEQNSHIPIPLQRLFISQSLQLLTQSDSALL
SDLGIRPLSTLTLHIPVFGGTQPPAVPKPRLEFLNSKPPPNYVAGLGRGATGFTTRSDIG
PARAAPDLPDRSATTIGGAAAPAAPPGVGRGRGKPDEEEEDEGEDKGYDENQKFDEFEGN
DVGLFASAEYDDEDKEADAVWEAIEQRMDSRRKDRREARLKEEIEKYRASNPKITEQFAT
LKRKLYTVSAQEWESIPEIGDYSSRNKKKRFESFVPVPDTLLEKARQEKEHVTALDPKSR
GAGGTETPWSQTPVTDLTAVGEGRGTVLSLKLDRLSDSVSGLTVVDPKGYLTDLKSMKIT
SDAEISDIKKARLLLKSVIQTNPKHPPGWIAAARLEEVAGKIQAARQLIQKGCEECPKSE
DVWLEACRLSSPDEAKSVISKGVKSIPNSVKLWMQAAKLERDDLNRSRVLRKGLEHIPDS
VRLWKAVVELANEEDARLLLHRAVECCPLHIELWLALARLETYDNARKVLNRAREKLSKE
PAIWITAAKLEEANGNTAMVGKIIERGIRALQREGLAIDREAWMKEAEAAERAGSVATCQ
AIIRNTIGIGVEEEDRKRTWVADAEECKKRGSIETARAIYAHALTVFLTKKSIWLKAAQL
EKSHGTRESLDALLRKAVTYRPQAEVLWLMGAKEKWLAGDVPAARAILQEAYAAIPNSEE
IWLAAFKLEFENHEPERARMLLAKARDKGGTDRVWMKSAIVERELGNINAERKLLDDGLK
RFPSFYKLWLMLGQLEERLGHLEKAKEAYDSGLKYCSSSIPLWLSLANLEEKMTGLSKAR
AILTMARKKNPQNPELWLAAVRAELRHGNKKEADILMAKALQECPNSGILWAASIEMVPR
PQRKTKSMDALKKCDHDPHVIAAVSKLFWHDRKVDKARTWLNRAVTLAPDIGDFWALYYK
FELQHGTDENQKDVLKRCISAEPKHGEKWQPISKAVENSHQPTEAILKKVVVALGKEESA
AENNKQ
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcatcacatcccccaatcacaaaaccctaaccctaaatctaaaccctaagacc
accactctccaagccctaaagctccaaatcgagcaaaattcccacatacccattcctctg
cagcgcctattcatctcccagagcctccaattgctcacccaatccgactccgccctcctc
tccgacctcggaatccgacccctctcaaccctaactcttcacatccccgtattcggcggc
acccaacctcccgccgtccctaaaccccgcctcgagttcctgaactccaagcctcccccg
aattatgtcgccgggctcggccgtggtgccactggctttaccaccaggtctgatatcggg
cccgcacgtgccgcgcccgacctgcctgataggtcggccaccacaatcggaggcgctgct
gctcctgctgcaccgcctggggtcggccgagggcgcgggaagcccgacgaagaggaggag
gatgaaggggaggataaagggtacgatgagaatcagaagtttgatgaattcgaagggaat
gatgttgggttgtttgcatcggcggaatatgatgatgaggacaaggaggctgatgcggtg
tgggaagccattgagcaaagaatggactcgcgcaggaaggacaggagagaagcacggttg
aaagaagagattgaaaagtacagagcttcgaacccaaagatcacagagcagttcgctact
ctgaagaggaagttgtacactgtgtctgctcaggaatgggagagcataccagaaattgga
gactattcgtcgaggaacaagaagaagagatttgaaagctttgtgccggtgcccgataca
cttttagagaaagcaagacaggaaaaggagcatgttacggcattggaccccaagagtagg
ggagctggtggtacggagactccgtggtctcaaactccggttacggatttgactgctgta
ggtgagggtagaggtactgttttgtcattgaaattagataggctttctgattctgtttct
ggattgacggttgtggacccgaaagggtaccttactgatcttaagagtatgaagattact
agtgatgctgagatttcggatattaaaaaggctaggttgttgcttaagagtgttatacag
acgaatccaaagcacccacctggttggattgctgctgcaaggctggaggaggtggctggg
aagattcaggcagctagacaattgattcagaaagggtgtgaagaatgtcctaagagtgag
gatgtgtggttagaggcgtgtaggctttcaagccctgatgaagctaagtccgtgatttct
aagggagtgaagtcgattcccaattcagtgaagttgtggatgcaggctgcgaaattggag
cgtgatgatttgaataggagcagggtattgaggaaaggtttggaacacattcccgattct
gttaggctatggaaggcagtggtggagcttgccaatgaggaggatgcgagacttttgctt
catagggctgtggagtgttgtcccttgcacattgagttatggcttgcacttgcaagattg
gaaacttatgataatgcgaggaaggtccttaatagggcaagagagaagttatcaaaagag
cctgccatttggatcacagcagcgaagttggaggaagctaatgggaacacggccatggtt
gggaagattattgaaaggggtataagggctttgcaaagagaagggttggcgattgataga
gaggcatggatgaaggaggctgaagctgctgagcgtgcagggtctgttgcaacttgccaa
gcaatcattcggaacacaattgggattggtgtggaggaagaggataggaagaggacatgg
gttgctgatgctgaggaatgcaagaaaaggggttccattgaaacagccagagctatttat
gcacacgcacttactgtctttctaaccaagaagagcatatggctcaaagccgcacagctt
gaaaagagccatgggactagggaatctcttgatgccttacttcgtaaagcggtgacatac
cgaccacaggctgaagtcttgtggcttatgggagctaaggagaagtggcttgctggggat
gtgcctgctgctcgtgccatccttcaagaagcttatgctgccattcccaattccgaagaa
atttggcttgctgcatttaaacttgaatttgagaaccatgaaccagagagagctagaatg
cttcttgccaaagcccgagacaagggaggcactgacagagtgtggatgaaatcagcaatt
gttgagagagaattagggaacattaatgcggagaggaagttgcttgatgatgggttgaag
cgcttcccttccttttataaattatggttgatgcttggacagctagaggaacgccttggt
catttggagaaagccaaggaggcctatgattcgggtctgaagtactgctccagttctatt
ccactgtggctttctcttgctaatcttgaagagaagatgactggtctgagtaaagctcgt
gcaattctgacgatggcccgaaagaagaatcctcagaaccctgaattgtggcttgctgct
gttcgagctgaattaaggcatggaaataagaaggaagctgatatcttgatggcaaaggct
ttgcaggagtgtcccaatagtggtatattgtgggctgcgtccattgagatggtaccccgt
ccacaacggaagacgaagagtatggatgccctcaagaaatgtgatcatgatccccatgtc
attgctgctgtgtctaagttattttggcatgacaggaaggttgacaaagctaggacttgg
cttaacagggcagtgacactagcgccagatattggggatttctgggctttatactacaaa
tttgaacttcaacatggaaccgatgagaaccagaaagatgtacttaaaaggtgcatatct
gcggaaccaaagcatggtgagaaatggcaacctatttcaaaggccgttgagaactcccac
caaccaactgaagccatcttgaagaaagtggtggttgctcttgggaaggaagagagtgca
gctgaaaataataaacagtag
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