Pyrus x bretschneideri (Chinese white pear): 103948763
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Entry
103948763 CDS
T03446
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pxb03009
]
103948763
Ribosome biogenesis [BR:
pxb03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
103948763
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
RYDR_ITPR
Motif
Other DBs
NCBI-GeneID:
103948763
NCBI-ProteinID:
XP_018503361
LinkDB
All DBs
Position
Unknown
AA seq
2724 aa
AA seq
DB search
MATLSQAQAVKSLNKSPGRRRFVFKNFSERLDDVEIDVFRSLDKVKSEPHEGSTFFRDCL
IEWRELNTAEDFISFYEQMTPLVQTLPLILLHKETIISELVSRLQMDARLSLEPILTLIA
ALSRDLLEDFIPFLPRIADSLVSLLESGTDREPEIIEQIFTSWSSIMMYLQKYLVQKIKH
ILKVTVKLRYYPKYHIQKFMAEAVSFLLRNAPFEQLKEGVRKIMFEVVKKSTDTRKEGVS
KLLYFVMRGTSSRFHSRAERVLHFLMDDLILCIGEQFNEGSETVLEVLKSALESLCVDLD
SKELNLMFNCLYREITDSVINGGVERLSRLLSLLVSTVQVKNGQRVSDYQQMIEIVGLVM
PKGIPMTEESSSDVVDKLLELMLCILRGLHNLSDMSTISSCSLQWAPVFDLKNPSLLGFV
RELLKEDVCIVNIFRANILRAMNDLIETSQEDVIYLLLTFCEKQQTEIQSLTFLDETPER
VSRIQDFLRGTINNWVGVLKGIGNGDSSSTIILEVDLALLWGTINCFPQVVESENDLSLL
KDLINAYDQILMIEADNVAGFPKHTWESLIGATLNSYYKMIHGKKSELDETSRFLHLGKR
HKSCAQVLVAVADFLDSEYGRSMMEGDTESRTYHPELKADMAVEALDIFADNLCQSDREI
RASTLRILCHFETLNCNTFTEDYPVAKKMRTEVSPTCHVDKHSLNVLALLLSIESTPLSI
STSRKVTLLISRIQMALSAGRIAEAYLPLVLNGMIGIFHNRFSYLWNPASECLAVLISQN
IGLVWENFVSYFEQCQSRFQASFDQIDKVNSRTTNKSIGLLGHFDLCVNSTSTSTPSAAV
LSSLLQSLQRIPTLIESKSRQILPLFLKFVGYSCKDFRSCSIGSFNASVCRGKEWKGVLK
EWLNLLKLMHNLKSFYQNQFLKDVLQIRLLDENDDEIQTKVLDCLFIWKDDFLLPYCQQL
KNLASFHNLREELTTWSLSRESNLIEEHHRAYLVPIVIRLLMPKVRKLKKHANQKHSGVN
HRKSVLGFISQVDVEELPLFFALLVKPLQIVPMGSDGAANWFWTLPNVSLAEFQASHFLK
YFTVSSISALSWKKRSGFLHVIEDIIGVFDILRVGPFLDFLMGCVARLLESCSLSIEVAK
AKEAGKAKGSSLENNLDVNRTLLGKDSAVETNVSISPALGQLRDLRSLCLKIISFVLNKY
EDHDFSSEFWDLFFVSVKPLIDRFKQEGSSGQKPSSLFSCFLALSRSQKLVPLLCREQKL
VPDILSILTVTSTSEAIVSCVLKFVDNLLTLDHEWGDEDSAVKGVILPNLEALIDNLHCL
FQSNNAAKRKLYKHPGETEKRIFQFLPKYIEHALPARKFLDILLPVLANGAQNSDFCFEA
VQVIRDMVPILGNAITNKILNAVSPLLTSTDLDKRVFICDLLEAVARADPSVQFVAKLLQ
DLNATSVTELGSLDYDKVVNAYEKISVDIFYTVPEDHALVILSHCVYDMSSEELILRHSA
YNSLRSFVEFAALILGQVDHCEMPDKMSASDDHCWTRACIQRITNKFLLKHMGNALKRGT
SVRKEWVDLLRQMVKNLPEVANLGSLKDLCDDDAEIDFFNNIVHLQKHRRARALTRFRNV
ISTSYMPEGITKKVFVPLFFNMLLEEHEGKGEHVKNMCIEALASISSHMEWNSYYSLLMR
CFNEMNKNPNKEKLLLRLICSILDKFHFSDAKDSLDNDSNTGTTDTGSTILRKCSNSVSI
NEIQTCLQKVVLPKIQKLLSDSEKVNANISLATLRVLRLLPGDVMDSQLPSIVHRVSNFL
KNRLESIRDEARSALAACLKELGLEYLHFMVKVLRATLKRGYELHVLGYTLNFILSKFLV
TPISGKLDYCLEDLLCIVTNDVLGDVAEEKDVEKIASKMKETKKQKSFETLKLISQSITF
KSHALKLLSPVTAQFEKHLTPKTKTKLESMLTHIGAGIECNPTVDQTDLFIFVHGLIEDG
IKEENGQSENLFITWVNGRRRNFMSGKDISSGGVSGGKSVCSHLISVFALGIFLKRIKNV
KLGKADEQMLSMLDPFVLLLGKCLKSKYEDVVSASLRCLTRLVRLPLPAIESQADSIKAA
LFGIAGSTGNTGGSQMESCLRLLTELLRGTKVPLSSDQLHLLIQLPLFVDLESNPSFVAL
SLLKAIVNRRLVVPDIYDLVTRVANLMVTSQVEPIRHKCSKILLQFLLEYRLSTKRLQQH
LDFLLSNLRYEHSSGRKTVLEMLHTIIVKFPQNVVDEQSQTFFVHLVICLANDQDNEVRS
LAGVAIKCLIGYISSHSFRSILEYSLSWYLGGKQQLWSAAAQVLGLLVEVMDKEFQKHVN
KLLPVEDMEKEFLKHINRILAATKSILLSAIDRVTDEQLDFSNETSIPLWKEAYYSLVML
EKMLHQFRSLCFDRDLEDIWAAICEILLHPHMWLRCISSRLVALYFDAAKAASKDDGKPL
GIYYLIRPSRLFMIAASLCCQMKTQLNDDAASNLITENLAFSVCHVHSLIGQTECADPHQ
FWSNLEQHEQAHFLRAFELLDARKGRSMFLSLTSGICDPNDESASKNIQYLIVSNLLKKM
GKTALQMEAIQMKIVFDSFQKVSSYLSEEDCRLYAYEILLPLYKVCEGFSGRVIHENTKQ
LSQEVTDSIRKKLGTQKFVLVYGDIRKNLKAKRDKRKNEEKRMAVVDPMRNAKRKLRIAE
KHRANKKRKIMSMKMGRWTHSKPK
NT seq
8175 nt
NT seq
+upstream
nt +downstream
nt
atggccactctctcccaagctcaggccgtcaagtccctcaacaaatcccccggacgccgc
cgtttcgttttcaagaatttctctgagagacttgatgatgtagaaatcgatgttttccga
agcctcgataaagttaagtcggagccgcatgagggctctacttttttccgggactgcctc
atcgaatggagggaactgaacacggctgaggatttcatctctttctatgagcaaatgacg
ccgttggtccaaacgttgcctttgattctgttgcacaaggaaaccataatctcagaactc
gtttcgagattacagatggatgcaaggctgtcgcttgagcccattctcacgttaatcgcc
gctctgtcgagagatctcctggaggactttatccctttcttgccgaggattgctgattct
ctagtgtctcttctagaaagtggtacagatagggagccagagatcattgagcagatcttt
acatcttggtcatctattatgatgtacttacaaaaatatcttgtacaaaagattaagcat
atactaaaggttactgtaaaattgaggtactatccaaaatatcacatccaaaaatttatg
gcagaagcggtctcattcttgctgagaaatgcaccttttgaacaacttaaagaaggtgtc
agaaagatcatgtttgaagttgtgaagaaatcaactgatactagaaaagagggagtcagt
aaattactgtattttgtcatgagaggaacctcatcaaggttccattctagagctgagaga
gtgttgcatttcctgatggacgacttgatactttgcattggtgaacaattcaacgaaggt
tcagagactgttcttgaagtcttaaagtctgcgttagaaagtttatgtgtggatttggac
tccaaggaattgaacttaatgttcaattgcttatatcgggaaataactgactctgtgatt
aatggaggtgttgaacgtttaagccgcctgttgtcgttgcttgtttctactgtgcaagtt
aagaatggccaaagggtttctgattaccaacaaatgattgaaattgtggggttggtcatg
cctaagggcattccaatgacagaggagtcttcatctgatgttgttgataagcttttagag
ttaatgctctgtattcttaggggactgcacaatttaagtgatatgtcaaccatctctagc
tgttcattgcagtgggctcctgtatttgatctaaagaacccaagcttgttgggttttgtt
cgagaattattaaaagaggatgtttgcattgtaaatatcttcagagctaacattttaagg
gcgatgaatgatttaatagaaacttcccaggaagatgttatttatttgttactcaccttc
tgtgaaaaacagcaaacggaaatccaaagcttgaccttcttagatgaaacacctgaaaga
gtttcaaggattcaagattttctgcgtgggactatcaacaactgggttggggttttaaag
ggtattggaaatggggactcatcatccacaataattcttgaagttgacttggctctgctg
tggggaaccatcaactgctttccccaagtagtagaatctgaaaatgatttatccttgtta
aaggatttaataaatgcatatgatcaaattctgatgattgaagctgacaatgttgcaggt
tttcctaagcacacttgggagagcctaattggtgctaccctgaattcctattacaaaatg
atacatggtaaaaaatctgagcttgacgaaacaagcagatttttgcatcttggaaaaaga
cacaaatcatgtgcacaagtgttggttgctgttgctgattttttggattcggagtacggt
aggtctatgatggaaggagacaccgagtctagaacatatcatccagaattaaaagcagat
atggctgtagaggctttagacatatttgctgataatttatgccagtcagacagagagatt
cgcgcttcaactcttcgaatattgtgccactttgaaactctaaattgcaatactttcaca
gaggattacccagttgcaaagaaaatgagaactgaagtttctccaacttgtcatgtggat
aaacacagcttaaatgttcttgctctccttctctccattgagtcaactcctctttcaatt
tctaccagcaggaaagttactctcttgatttctagaatacagatggccctctctgctggt
agaatagctgaagcttatctgccccttgttttgaatgggatgattggtatcttccataac
cggtttagttacctttggaatcctgcatcagagtgccttgcagttctgattagccaaaac
attggacttgtgtgggaaaattttgttagttattttgaacaatgccaatcgagatttcaa
gcatccttcgatcaaattgacaaagtaaattctaggacgaccaacaagtcaattggcctg
ctcggacactttgatttgtgtgttaattccacatctactagtacaccttctgcggccgtg
ttatcttcattgctccagtctttacaaagaattccgaccctaattgaatctaagtctcgc
cagattttacctttgtttttgaagtttgtgggctacagttgcaaagactttagaagctgc
agcatcgggtctttcaatgcaagtgtttgtagaggcaaagagtggaaaggtgtccttaaa
gaatggttaaacctgctgaaactgatgcacaaccttaagtccttctatcaaaatcagttc
cttaaagacgttttacaaattagacttttagatgaaaatgatgatgaaatacaaacaaag
gttcttgattgtctgttcatatggaaagatgatttcctgcttccatactgtcaacaattg
aaaaacctagccagctttcataatttgagagaggaattaacaacgtggagtttatccaga
gagtccaatctaattgaggaacatcacagagcttacctggtgcctatagttatccgtctt
ctgatgcccaaagtccgcaagttgaagaaacatgctaatcagaagcattcaggagtaaat
catcggaagtcagttcttggtttcatatctcaagttgatgttgaagaacttcctcttttc
tttgcattgttggtaaagcctttgcaaattgttccaatgggaagtgatggtgctgcaaac
tggttttggactttgccaaatgtttctctggccgaatttcaggcatcgcatttcttaaaa
tatttcactgttagcagtatatcagccctgtcttggaagaaaagatctggttttctgcat
gtgatcgaagatatcattggagtttttgatatattgcgtgttggtccctttcttgatttt
cttatgggatgtgttgcccggttattagaaagctgcagtttaagtattgaggtggcaaag
gccaaagaggcggggaaggccaagggatcttcattggaaaataatctggatgtgaaccgt
actttgcttggaaaagatagtgcagtggagactaatgtttcgatctccccagctttgggg
cagcttagggatctcaggtctttatgcctgaaaattatctccttcgttctcaacaagtat
gaagatcatgattttagtagtgagttctgggacctattctttgtgtcggtcaagccttta
attgatcgtttcaagcaggaaggatctagcggccagaaacctagttcgctcttctcttgt
tttcttgcgctgtctagaagccaaaaacttgtaccactactttgcagggaacaaaaactt
gttcctgatatactctcaattctaacggtcacatcaacatctgaagctattgtatcttgt
gttctcaagtttgttgataacctgttgactcttgatcacgagtggggtgatgaagatagt
gctgtgaaaggagttatactcccaaaccttgaagcactcatcgataacctgcattgtctt
tttcaaagtaataatgctgccaagaggaaattatataaacacccaggagagacagagaaa
agaatttttcagttcttacctaagtatatagaacatgctttgccagccaggaaatttttg
gatatcttgcttccggttttagcgaatggagctcagaattcagatttctgttttgaagca
gtgcaagtaattcgtgatatggttccaatactggggaatgcgattacaaataaaattctt
aatgcagtatctccactacttacttctactgatctagataaacgtgtttttatttgtgat
cttcttgaggctgttgctagagcagacccttctgttcaatttgtggcaaaactgttacag
gacttgaatgcaacctctgttactgaactgggtagccttgattatgacaaagttgtcaat
gcttatgaaaagatcagtgttgatatcttctatacagtcccagaggatcatgcattagtc
attttgtctcattgtgtctatgacatgtcgtctgaagaattaatcttgaggcacagtgct
tacaattcattgcgctcatttgttgaatttgctgccctaattcttggccaagtagaccac
tgtgaaatgcctgacaagatgtcagcatctgatgatcattgttggaccagagcgtgcatt
cagagaataacaaacaagtttcttttgaagcatatgggcaatgctttgaagagaggaact
tctgtcagaaaggaatgggttgatttactaagacaaatggtgaaaaatctaccagaagtg
gcaaatctgggttcattgaaggatctttgtgatgatgatgctgaaatagattttttcaac
aatatcgttcacctacagaaacataggagagcaagggcattgacacgctttaggaatgtt
atcagtaccagctacatgccagagggcatcacaaagaaagtgtttgtacccctttttttc
aatatgttgttggaggagcatgaaggaaaaggagaacatgtcaaaaatatgtgcatagag
gcccttgcttcgatttcgagtcacatggaatggaattcatactactcgttgttgatgaga
tgctttaatgagatgaacaagaatcctaataaagaaaagctccttctgcggctaatctgt
tccatcttggacaagtttcacttttcagatgccaaagactccttggacaatgattccaac
acagggaccactgatactgggtctacaatcttgcgtaagtgtagcaattctgtttcgata
aatgaaatacagacttgccttcaaaaagtcgtgctgcctaagatacaaaagttactgagt
gattctgaaaaggtcaatgctaacatcagtcttgctacactaagagtattaaggttgctt
cctggagatgtaatggactcacagctgcctagcattgttcatcgagtttcaaattttttg
aagaatcgattggaaagcatccgtgatgaagctaggtccgctttggctgcttgtttgaag
gagttggggctggaatacttgcattttatggtcaaggttttgcgagctaccttgaaacgg
ggatatgagttacatgtgctgggatacacactaaactttattttgtcgaagtttcttgtt
actccaattagtggaaaattggactactgtttggaagatctcctttgtattgtaacgaat
gatgttcttggagatgttgctgaggaaaaagatgttgaaaagattgcttccaagatgaaa
gaaactaagaaacagaagtcttttgaaaccctgaaattgatttctcaaagcataacattc
aaaagccacgcgttgaagcttctgtcacctgttacagctcaattcgagaaacatttgaca
ccaaaaaccaagacaaaattggaaagtatgttaactcacataggtgctggtattgaatgc
aatccaactgttgaccagacagacctttttatattcgtacatggcctgatcgaagatgga
ataaaagaagaaaatggtcagagtgagaatttgtttattacatgggtaaatggacgtcgg
cgaaattttatgagtggaaaagatatttcctcggggggtgtctcaggtggtaaatcagta
tgttctcatcttatttcagtttttgctcttgggatatttctgaaacgcataaagaatgtg
aaattgggaaaagctgatgaacaaatgttgtcgatgttggatccttttgtcttactgtta
gggaagtgcttgaaatccaagtatgaagatgttgtatctgcatcacttagatgcctcacc
cgactggtcaggttgcctttacctgccatcgaatctcaggcagatagtattaaagccgcg
ctgtttggtattgctggaagtacgggtaatactggaggttctcaaatggagtcatgcctg
aggttgttaacagaacttctgcgcggcaccaaagtccctctttcctccgatcagctacat
ctgctaattcagcttccattgtttgttgatcttgaaagcaatccctcctttgttgctctt
tcacttctaaaggcaattgttaaccgcaggctagttgttcctgatatatatgatcttgta
acaagagttgcaaatttgatggtaacaagtcaagtagaaccaattcgtcacaagtgtagc
aagattttattgcaattcttacttgaatatcgtctctctacaaaacgtttgcaacaacat
ttggattttctgctgtcaaatctgaggtatgagcattcaagtggaaggaaaactgtgctt
gagatgctccacacaattattgttaaatttccacaaaacgttgtagatgagcagtcacag
accttttttgtccacttggtgatttgcttggctaatgatcaagataatgaagttcgttcc
ttggctggagttgctataaaatgtctcattggctatataagctcacattcatttcgttcc
attcttgagtacagcctatcttggtatttgggtgggaagcagcaattatggagcgctgca
gcacaggttttgggacttctggttgaagtcatggataaagaatttcagaagcatgtcaat
aaattattgccagttgaagacatggagaaagaatttcttaagcatatcaacagaatattg
gcagcgactaagagtatcttactgtctgccattgatagagtcactgatgagcaactagac
ttttctaatgaaactagcattcctttgtggaaggaggcatattattcgttagttatgctg
gagaaaatgctgcatcagtttcgtagtttatgctttgatagggatcttgaggatatatgg
gcagcaatttgtgaaatacttctgcatccacacatgtggttacgctgcatttccagtcgc
cttgtagctttgtactttgatgctgccaaagccgcctctaaagacgatggaaaaccatta
ggaatttactatcttattagaccaagtagacttttcatgatagctgcgtctctctgctgc
caaatgaagacacaactcaatgatgatgctgccagcaatctgattactgaaaatcttgca
ttcagtgtttgtcatgtgcattcattgattggacaaacagagtgtgctgatccacatcaa
ttctggtccaaccttgaacagcatgagcaagcccattttcttcgagcttttgagttgctc
gatgctagaaaaggaaggagcatgtttttatcccttacctctggtatatgcgacccaaat
gatgaaagcgcctctaagaatatccaatacttgatcgtctctaacctgctcaaaaaaatg
ggcaagactgcccttcaaatggaggcgattcagatgaaaattgtctttgatagttttcaa
aaagtttcatcctatttaagtgaggaagactgccggctttatgcctatgaaatcttgctg
ccgttgtataaagtttgcgaaggattttctgggagagtgattcatgaaaatacgaagcag
ttatcacaagaagttactgacagcatacgaaagaaactaggcacccaaaagtttgtacta
gtttacggtgacatcaggaagaatctcaaggcgaaaagggataagaggaaaaatgaagaa
aagcgcatggccgtcgttgatcccatgcggaatgctaagaggaaactgaggatagcagag
aagcatcgggccaacaagaaaaggaaaataatgtcgatgaaaatggggaggtggacacat
tcgaagccaaagtaa
DBGET
integrated database retrieval system
