Pyrus x bretschneideri (Chinese white pear): 103949123
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Entry
103949123 CDS
T03446
Name
(RefSeq) dicer-like protein 4
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pxb03036
]
103949123
Chromosome and associated proteins [BR:
pxb03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
103949123
microRNA pathway
RISC loading complex
103949123
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
DEAD
Helicase_C
ResIII
DND1_DSRM
dsrm
PAZ
Cas3-like_C_2
GA-like
nSTAND3
Motif
Other DBs
NCBI-GeneID:
103949123
NCBI-ProteinID:
XP_009358497
LinkDB
All DBs
Position
Unknown
AA seq
1624 aa
AA seq
DB search
MDGAGGSSPPSDQGGSSTDRVKSGHGASKPEKDPRKDARKYQLDLCKKALEENVIVYLGT
GCGKTRIAVMLIYEMRHLIRKPQKSVCVFLAPTVALVQQQARVIEDSLGFDVGIYCGGSN
QLKYHQDWEKEIEQYEVFVMIPEVLLRNLCHCFIKMESISLLIFDECHHAQVQSNHAYAE
IMKLFYDANTTKRPRIFGMTASPVVGQGASSRENLSKCINSLESILDAKVYSVDKKELDC
FVSSPVITVYDYGPVISDASSPYITYYTKLEQMKHQCIAELGKKTNDHQSLRSTKKLLNR
MHESIRFCLENLGLWGALKASHVLLSGDHLERSELIEEEGNNGDDSLCVRYLTQVDGILT
TDCLKDSIADDLSSIDILKEPFFSRKLLRLIGVLSSFRLQQNMKCIIFVNRIVTASSLSY
ILQRLKFLASWKCDFLVGVNSRLMNMSRKKMKIILDKFRSGELNLLVATKVGEEGLDIQT
CCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVNSGNQKERDLIETFRQDEAHMNMEIA
FRTSSETFVGSADRVYKVDSSGASISSGYSISLLHKYCSKLPHDEYFDPNPKFFFFDDLG
GTVCQIILPSNAPIHQIVGTQQSSMEDAKKDVCLKAIEELHKLGALNDFLLPQQDNANEV
ELVSSDSDSTEDEDPRGELHKMLVPDALKEPWSSSEDLVSLSSYYIKFNPVPEDRIYRSF
GLFVKAPLPVEAETMELDLHLAHSRSVITKLVPSGFANFGKDEIVLAQNFQEMFLKLVLD
RMKFVSDYVPLGRHDRSSSSTFYLLLPVMLGNDDKIASIDWGTIRKCLSSPVFRAPGDAT
EKVPSLDIRLASGYKSIRDIQNSLVYVPYKKSFYFITDVVREKNGYSQYKNSGTLTYVDH
LIQKFGIHLKYPEQQLLHAKPLFSLHNLLHNRRQEDSGPTQLEEYFISLPPELCELKVIG
FSKDIGSSISLLPSLMHRLENLLVAIELKHVLAASFPEGGAVTAKRVLEALTTEKCQERL
SLERLEILGDAFLKFAVGRHFFLRHGSLDEGGLTRKRSNVVNNSNLFKLATRSNLQVYIR
DQPFEPSQFFALGRPCPRICNEETVGAIHFHDLSGEVNHTSASEVRCSKGHHWLYKKTIA
DVVEALVGAFVVDSGFIAATAFLKWIGIQVDFEPSQVTEACIASSRYIPLSACMNIAALE
NLLGYKFLHRGLLLQAFVHPSYNKHGGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQ
LTDLRSVSVNNKAFANVAVDRSFHKFLISDSSSLSEAIESYVGFIETAASDRGLLDGPKC
PKALGDLVESCLGAILLDTGFNLNRVWEIMLSFLKPIMSFSSLQLSPIRELRELCQAHSW
GLEFVPTKMGKKYSVCATVNGNNVCVSASTTSLNKKDGIRICAQLIFDKLKAQGNIPMTN
SLEEVLKSSREMEAKLIGYDETPIDVVLLDASGFDNLNVQEVSRRNFNSQGHPINQERNG
HSSCRKPVRQSPSSSGAVKMRPNKTRENSKNDVNSQSGGTHTATSRSRLYEVCAANYWET
PLFECCNEEGPSHLKSFTYKAVVKIEEDPDTLLECFGEPNMKKKAAAESAAEGALWYLKN
RGFM
NT seq
4875 nt
NT seq
+upstream
nt +downstream
nt
atggacggcgctggcggaagttctccaccgtctgatcagggcggttcgtctaccgaccgg
gtcaagtccggtcatggagcttcgaagccggagaaagacccgaggaaggacgccagaaag
tatcaattggacctgtgcaagaaagctttggaggagaacgtaattgtgtatctagggact
ggttgtgggaaaacccgcatagcggtcatgcttatatacgagatgcgccacttgatccgc
aaaccccaaaagagcgtatgcgtgtttcttgcacccacagtggctctggttcaacagcaa
gctagggttatagaagattcccttggtttcgatgttgggatttattgtggaggctctaac
caattgaagtatcaccaagactgggaaaaagagattgaacaatatgaggtttttgttatg
atccctgaagtactgctacgaaacttatgtcactgtttcattaagatggagtcaatttct
ttgttgatatttgatgaatgtcatcatgctcaagtccaaagcaaccatgcctatgcagaa
attatgaaattgttttacgatgctaataccacaaaacgtcctcgtatatttggcatgacg
gcatctccagttgtagggcaaggtgcttcgagtcgggaaaacttatcaaaatgcatcaat
agtcttgaaagtatacttgatgctaaggtttattcagttgataagaaagaattggattgt
tttgtctcatctcctgtcatcacagtgtatgattatggtccagttataagcgacgcatcc
agcccctatatcacttactacactaaacttgagcagatgaaacaccagtgtatagcagaa
cttggtaagaagacaaatgatcaccaaagtctaaggagtacaaagaaactgttgaacaga
atgcatgaaagtatacggttttgcttggaaaatcttggcctttggggagcattaaaagct
agtcatgttcttttgagtggcgatcacttggaaaggagtgaactaatagaggaggaagga
aataatggtgatgattctctatgtgttagatatctgactcaggttgatggcatccttact
actgactgcttaaaagattccattgctgatgatctatcttctatagatattttaaaggag
ccatttttctcaagaaagctcttacgtcttattggagttctttcatcctttaggttgcaa
caaaatatgaaatgcataatttttgtcaatagaattgttactgcgagttccttgtcttac
atactacaacgcctcaagtttctagcatcttggaagtgtgattttcttgtaggagtcaac
tctagactgatgaatatgtcaaggaagaagatgaaaatcattcttgataagttccgatct
ggagagttgaatctattggttgcaactaaagttggtgaagaaggactagatattcagacg
tgctgccttgtgatacgatttgatcttccagaaactgttgctagctttatacaatcacga
ggtcgtgcacggatgcctcagtctgaatatgcatttttggtaaacagtggcaaccagaaa
gagagagatttaatagaaaccttcagacaagatgaagctcacatgaacatggaaattgct
ttcagaacatccagtgagacatttgttggttcggcggatagggtgtataaagtcgattct
tctggtgcttccatcagttctggatatagcatctcattgttacacaagtattgttcaaag
cttccacatgatgagtactttgaccccaatccaaagttcttttttttcgatgacttgggg
ggaactgtttgtcagataattttaccttccaatgcgccaatccatcaaattgtcggaaca
caacaatcttcgatggaagatgccaaaaaagatgtttgtctaaaggccattgaagaattg
cataaattaggtgccttaaatgactttctcttaccacagcaagacaatgcaaatgaggtg
gagttggtgtcttctgattctgacagtaccgaagatgaggatccaagaggagaactacat
aaaatgctagttcctgatgcactaaaagagccatggagtagttcggaggaccttgtttcc
ctcagctcatactatataaaatttaaccctgttcctgaggacaggatctatagaagcttt
ggtctatttgtcaaggctcctctcccagttgaagccgaaacaatggaacttgatcttcat
ctcgctcatagtagatctgtgattacaaagttggtcccttcaggatttgccaattttggc
aaagatgagatcgtgctggcacaaaattttcaagaaatgttcctcaagctcgtccttgac
cgaatgaaatttgtttctgattatgttccattgggaaggcatgatagatcaagctcatca
accttctacctgttgcttccagtaatgttgggtaacgatgataagatagcaagcattgat
tgggggactatcagaaaatgtttatcatccccagtgttcagggctccaggagatgctaca
gagaaagttccttctttggatattcggcttgcatcaggttacaaaagcataagggatatt
cagaatagtttagtctatgtcccatataagaaatcattttacttcatcactgatgttgtt
cgagaaaagaatggctacagccaatataaaaactcaggcactttaacctatgtggaccat
ttaattcaaaaatttggcattcaccttaaataccctgagcaacagcttctgcatgccaaa
ccacttttctctttacacaacttgctacacaaccgaaggcaagaagattcgggaccgaca
caactagaggagtattttattagcttgccacctgagctttgcgagttgaaggtaatagga
ttttccaaagatattgggagttcaatatctttgttaccatcactcatgcaccggctggaa
aacctgcttgtcgccatcgaactgaagcatgtattagctgcttcattcccagagggaggt
gcggttactgccaagagagttctagaggcactcacaactgagaagtgccaggagcggctt
tcccttgaaaggcttgaaatacttggtgatgctttccttaagtttgctgttgggcgacac
ttcttccttcggcatggtagccttgatgaagggggactgacaaggaagcgttctaatgtg
gtaaacaattccaatttattcaagctagccacgagaagcaacttacaggtatacatacgg
gatcaaccatttgaaccctctcagttctttgctttaggccgaccttgcccaagaatttgt
aacgaggagacagtaggagctattcattttcatgacttatccggtgaagtaaatcacaca
agtgctagtgaggtcagatgcagcaagggtcaccattggttatataagaaaaccattgct
gatgttgttgaagcccttgttggagcattcgtagttgacagtggctttatagctgcaact
gcatttcttaagtggattggcatacaagtagacttcgaaccatcacaagttactgaagca
tgcatagcaagctctagatacatcccactttctgcttgcatgaacattgctgcccttgaa
aatttattagggtataagtttctccacagaggtctgctcttacaggcatttgtacatcct
tcttacaacaagcatggaggaggctgctatcagagattggagtttcttggggatgccgtc
ttggattacttgatcacctcatacctgtattcagtttatccaaagttgaagcctggtcaa
ttaacggatttgagatcagtgtctgtgaataataaagcctttgctaatgttgcagtagat
cggtccttccacaagtttctaatcagtgattcctctagcctttcagaggcgatagaaagt
tatgtgggcttcattgaaacagctgcatcagatagaggtctgcttgatgggcccaaatgt
ccaaaggctctgggcgacttggtagagtcctgtctgggcgcaattcttcttgatacaggg
ttcaacttgaatcgtgtttgggagataatgctatcctttctgaaaccaattatgagcttt
tccagcttgcaacttagtcctattagggaactacgtgaactttgccaagctcattcatgg
ggtcttgagtttgtaccaacaaaaatgggtaaaaagtattcagtttgtgcaacagtgaat
gggaataatgtttgtgtatctgcttctacgaccagcttgaacaaaaaggatggaataaga
atttgtgcacaactgattttcgacaagttgaaggctcaaggcaacatacctatgactaac
tcattggaggaagtcttaaagtcaagcagggagatggaagccaaacttattggatatgat
gaaacaccaatagatgttgtgcttcttgatgcaagtggatttgataacttaaatgtacaa
gaagtttcccgccgaaattttaactcccaagggcatcctatcaatcaagagagaaacggt
cactcttcctgcagaaaacctgtacgacaatccccatcttcatctggagcagtcaaaatg
cggcccaataagaccagggaaaattctaagaatgatgttaactcgcaatccggaggtaca
cacacggcaacatcaagatctcgtttgtatgaagtttgtgccgctaactactgggaaact
cccttatttgagtgctgcaatgaagaaggaccaagccacttaaaatcgttcacctacaag
gctgtagtaaagatagaagaagatccagatacgctgttagagtgcttcggagaacctaat
atgaaaaagaaagcagctgcagagagtgcggcagaaggggcactttggtacttgaaaaac
agaggttttatgtag
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integrated database retrieval system
