Pyrus x bretschneideri (Chinese white pear): 103949980
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Entry
103949980 CDS
T03446
Name
(RefSeq) SWI/SNF complex subunit SWI3A-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103949980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pxb03021
]
103949980
03036 Chromosome and associated proteins [BR:
pxb03036
]
103949980
Transcription machinery [BR:
pxb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103949980
Chromosome and associated proteins [BR:
pxb03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103949980
PBAF complex
103949980
GBAF(ncBAF) complex
103949980
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
103949980
NCBI-ProteinID:
XP_009359390
LinkDB
All DBs
Position
Unknown
AA seq
565 aa
AA seq
DB search
MELAPHDPGSNPLRPDEPELELYSIPRHSGWFRWDEIHETERIALKEYFDGSSISRTPKT
YKEYRDFIINKYREDPSRKLTFTEVRKSLVGDVSLLHKVFNFLEKWGLINFGANSGGGGG
FVAGGGERCKVKVEDGVPNGIRVAAMPNSIKPISQVSGQPKVGEVGGGGGVSRVGFPPLA
SYSNVFGDLKKEGLVCGNCGGHCDSGHYEYSKGDFLICVNCFENGNYGEKENKPRDDFQL
KEAVEKSSTNGAEWTESETLLLLESVFKYGDDWELVAQNVQTKTKFDCIAKLIDLPFGEL
VLGSAYRKDNSNGFSANLDSTEQVQLSSTGCQETIITKGQLHEQTDDGKQNRDTLSEGSP
LKRQRIASLSDASTSLIKQVAAISTMVGPQITAAAADAAINVICEETSCSREIFDTDDDF
LTNGVWSPAKNCETERVQDRDSEMKEKPAGSESQDALFRKDDIPPTLQIKAAIGTTLGAA
AAHSKLLADQEDRQIEYLMATIIGTQMKKLHFKLDYVKDLEQIMKKEHAQIEDAEEFLVQ
ERINVLQRTLDSSVPRWRGHPAMKS
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggaactcgctccacacgacccgggttctaatccgctccgacccgacgaaccagagctc
gaactctactccatcccacgccactctggctggtttcggtgggatgagattcatgaaact
gagagaattgcgttgaaagagtattttgatgggagctcgatctcgagaactccgaaaacg
tacaaggaatacagggattttatcattaataagtacagggaagatccttctaggaagctt
acattcactgaggttagaaagtcgcttgtgggtgatgttagtttgcttcataaggtgttt
aatttcttggagaagtgggggttgattaatttcggtgcgaattcaggtggtggagggggt
tttgttgctgggggtggtgagaggtgtaaggttaaggttgaggatggagttcccaatggg
atccgggtggctgcaatgccgaattccattaaacccatttcgcaggtttcgggtcaacct
aaagttggggaggttgggggtggtggaggtgtgagtagagttgggtttcctccgttggca
tcatactctaatgtttttggtgatttgaagaaggaggggttggtttgtggaaactgtggg
ggacattgcgattctggacactacgagtatagcaagggtgattttctgatttgcgtaaat
tgttttgaaaatggaaactatggggagaaggagaacaaaccgagggatgatttccagtta
aaagaggcagttgaaaagagcagtactaatggagctgaatggactgaatcagaaacccta
ttacttttagaatctgttttcaagtatggggatgattgggagcttgttgctcaaaatgtt
cagacaaagaccaaatttgattgtattgctaagctcattgatctaccttttggggagctt
gtattgggttctgcttacagaaaagacaattctaatggctttagtgctaatttggactct
acggagcaagttcagttatcttcaacagggtgtcaagagactatcataaccaagggtcag
ttgcatgagcagacagatgatggcaagcagaacagagacactttgagtgaaggttcacct
ttgaaaagacagcgcattgcttctctttcggatgctagtacttcactgattaaacaggta
gctgccatatcaaccatggttggtccacaaatcacagctgctgcagctgatgcggccatt
aatgtgatttgtgaggaaacctcatgttcaagggagatatttgacactgatgatgatttt
cttactaatggcgtgtggtctcctgctaaaaactgtgagacagagagagtccaagacagg
gattcggaaatgaaggaaaagccagccggatcagagagtcaggatgcactcttcagaaaa
gatgacatacctccaactttgcaaattaaagctgccattggaacaactcttggagcagct
gccgctcactcaaaattattggctgatcaggaggatagacagattgaatatctaatggca
accataattgggacgcagatgaaaaagctgcacttcaaactggattacgtcaaagatctg
gagcagatcatgaagaaggaacacgctcaaattgaagacgcagaagagtttctcgtacaa
gagcggattaatgtcttgcaaagaacactcgactccagtgtacctagatggaggggtcat
cccgctatgaaatcttga
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