Pyrus x bretschneideri (Chinese white pear): 103949982
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Entry
103949982 CDS
T03446
Name
(RefSeq) recQ-mediated genome instability protein 1 isoform X1
KO
K10990
RecQ-mediated genome instability protein 1
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
103949982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pxb03400
]
103949982
DNA repair and recombination proteins [BR:
pxb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
103949982
FA (Fanconi anemia) pathway
103949982
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RMI1_C
RMI1_N_C
RMI1_N_N
Motif
Other DBs
NCBI-GeneID:
103949982
NCBI-ProteinID:
XP_009359392
LinkDB
All DBs
Position
Unknown
AA seq
734 aa
AA seq
DB search
MSTLRRRLRLSYSSDEEDQPPPPPSQQQQSEEPGPQSHTVTHPPVTLDTPCPYPSDPLPV
TSSSEEEFIDVSDNLSSPSPPPSPVPEPVTRQYSPPLAPAPEPVTRPHPPPMAQAPEPQN
WPPPQRYDGCPISEHLQRLGLRLKREWLDACVHGLRQSVPGFQNFDVETKAKLCFEQFLV
SDMNRTGGGVLPENVASLHLVDLPGPYVLQVDEIVNISNPLKNRYQKTAVGLKRCLKLSL
TDGVQRVVAMEYRPIQALEALAPAGLKIAICNVHIRHGLLMLVPECIEVLGGLVEELDAA
RQRLVEEVNKPPRGNRTRNGVVPPLSTRLALAAWPPNTVNAAGHTNNSTMEAPTSVQAPN
QGAIFSVSARNTSSVSSRNTISVSSRTTSSVSSRNSSPVTAEEFTVPLSGQHSVVNPSST
GGRGVDEMPMDTTPYSRRNAIPNPLSDDFGVENLHLNTVRSSVRHSRESRVPENAIPNPS
FEDAVEDIEMDAVHFGGENHTRDSILNDEDITMIDENETHRAYASSDAVLNDEETDVVNE
FDRPEILSGDCERPFDYLSSLSAKLITMNIRSIRGKVKCVLTGVNKFQYTGDMYELGAYV
DDGTLISEILIDHNVVQNAIGYSPEEARAALSSPDNTEVRNMKAKMRQFQKFLMNFEGIM
LIEMRLHDLPIALEMTQGCAESDAWLLLRRLKASSPARTSQRASATAPTSRHASPPGRAS
EHLSSQSYPIEISP
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgagtacgctcagacgacgcctccgcctcagctactcttccgacgaagaagaccaaccg
ccaccgccgccatcacaacaacagcaaagtgaagaacctgggccacaatcgcatactgtc
actcacccgcccgttaccctagacacgccatgcccttacccctccgatccactcccagtc
acctcctcctccgaagaagaattcatcgatgtctccgacaatctgtcgtcgccgtcacct
ccgccttctccggtacccgagcccgttactaggcaatattctcctccgctggctccggca
cccgaacctgttacccggccacatcctcctcccatggctcaggcgccggaaccccaaaat
tggccacctccacagagatacgacggctgcccaataagcgaacatctccagaggttaggg
ctaaggctaaagagggagtggctcgatgcttgcgtccatggactccgtcaatccgtgccg
ggatttcaaaacttcgatgtggagacgaaggcgaagctctgcttcgagcagtttctggtt
tcggatatgaatcgaactggcggcggcgtgcttccggaaaatgtagcttctcttcatctc
gttgatcttcctggaccctatgttttgcaggttgatgagattgttaacatcagcaatcct
ctgaagaataggtatcagaaaactgctgttgggctcaagaggtgcctcaaattgtcattg
acagacggtgttcaacgtgtcgttgctatggaatacaggcctattcaggccctagaagct
ttggctcctgctgggttgaagattgctatatgtaatgtgcatatacgccacgggcttctt
atgctggtccccgaatgtattgaagttctaggaggattagttgaggaacttgatgctgca
cgtcaacggcttgttgaagaagtaaataagcccccaagaggaaacaggaccaggaatgga
gtagttcctcctctatcgactaggttagctcttgctgcatggcctcccaatactgttaat
gctgctggacacaccaataattcaacaatggaagccccgacctctgttcaagcacccaac
caaggtgctattttctctgtatctgcgagaaataccagctccgtatcttctagaaacacc
atctccgtatctagtagaactaccagctctgtttcttctagaaatagcagcccagtgact
gctgaagagtttactgttcctctcagtggacaacattctgttgttaacccatcatctact
ggtggccgtggtgttgacgagatgcctatggataccactccctatagcagaagaaatgct
attcctaacccattatctgatgattttggtgttgagaatctccatttaaatacagttcgg
tctagtgttcgtcatagcagggaaagtcgagtacctgaaaatgccattcctaacccatcc
tttgaggatgctgttgaagatattgaaatggatgctgttcattttgggggagaaaatcat
accagagattccattttgaatgacgaggatatcactatgattgatgagaatgaaactcat
agggcttacgcatcctcagatgctgttttgaatgatgaggaaaccgatgttgttaatgaa
tttgaccgcccagaaatactatctggagactgcgaacgtcctttcgattacctatctagt
ttgtcagccaagttgattacaatgaacattcgttctattcgggggaaggttaagtgtgtt
ttgactggtgtgaataagttccaatacacaggtgacatgtacgagcttggagcgtatgtt
gatgatgggactctcatttctgaaattctcattgatcacaatgttgtacagaatgcgata
ggttattctcctgaggaggccagagctgctctttcttctccagacaatacagaagttcgg
aatatgaaggcaaaaatgaggcagtttcaaaaattcttaatgaatttcgagggcataatg
cttatagagatgagattgcatgatcttccaattgcccttgagatgacgcagggttgtgct
gaatctgatgcgtggttacttttgaggagactaaaggcctcctctccagctcggacatca
caacgtgcctccgctaccgctccaacatcacggcatgcttcccctcctggtcgggcgtca
gaacatctctcctcgcagtcgtaccccattgagatatccccctag
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