Pyrus x bretschneideri (Chinese white pear): 103950020
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Entry
103950020 CDS
T03446
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103950020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pxb03021
]
103950020
03036 Chromosome and associated proteins [BR:
pxb03036
]
103950020
Transcription machinery [BR:
pxb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103950020
Chromosome and associated proteins [BR:
pxb03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103950020
PBAF complex
103950020
GBAF(ncBAF) complex
103950020
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
103950020
NCBI-ProteinID:
XP_009359443
LinkDB
All DBs
Position
Unknown
AA seq
541 aa
AA seq
DB search
MNNNNQPRNVGVPPHFGNSGAVSQPVAMNHQPHLLTQSQPPTQGGAHFPGHFQLSEPQAQ
ALAQAQYVNAHAQAQTQAAHAQFVQLQAQAQSLAQLHNANTSNVGGSSPSVATPSTGTAK
RANQKPPSRPPGSSSANTGSPFKTMELTPAARRKKQKLPDKQIPDKVAALLPESGLYTQL
LEFESRVDAALARKKMDIQESLKCPPRVQRTLRVYVFNTFANQTQTNPEKTNAEPPSWSL
KIIGRLLEDGRDPVVAGLTPKSRAKFSSLFKKVTIYLDQTLYPDNHVILWESSRSPALHD
GFEVKRKGDKEFTAIVRLEMNYVPEKFKLSPALHEVLGIEVETRPRIIAAIWHYVKARKL
QNPNDPTFFVCDPSLQKIFGEEKMKFSMVSQKISQHLTPPQPIHIEHKIKLSGNCPAGTT
CYDILVDVPMVLEKEMSAFLGSTERSKEIDACDELICASIKKIHEHRRRRAFFLGFSQSP
AEFINTLIASQSKDLKLVAGDASRNAEKERRSDFYNQPWVEDAVIRYLNRKSAGSDAPGS
T
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgaataataataatcagcccaggaatgtgggggtgccaccccactttggcaattctggg
gcggtgtcgcaacctgtggccatgaatcaccagcctcatcttctcactcaatcgcagcct
ccgacacaagggggagctcattttccagggcactttcaattgtctgagccgcaagcgcag
gcacttgcacaggcacagtatgtgaatgctcacgcacaagcccaaacccaagctgcccat
gcccaatttgttcagttgcaagctcaagctcagtctcttgcccagttgcataatgcgaat
acaagtaatgttggtggttcatcaccctccgtggcaacacctagcacaggaactgctaag
cgggcgaaccagaagccaccttctcggcctcctggttcatctagtgccaacacgggttca
ccatttaaaacgatggagctcaccccagctgctcgtagaaagaagcaaaagctacctgat
aaacaaataccggacaaagtggctgcacttctaccagagtctggtctttatactcagttg
cttgaatttgagtctcgtgttgatgctgctttggcaaggaagaagatggacatccaagag
tcccttaaatgtcctccccgtgttcagagaacacttagagtttatgtattcaacaccttt
gcgaatcagacacaaacaaatcctgagaagacaaatgcggaacccccttcatggtcactt
aagataattgggaggttactggaagacgggagggatcctgtggtggctggattgacacca
aaatcaagggcaaaattttcatcactgttcaagaaagttaccatatacttggaccaaacc
ctctatccagataaccacgtgattttatgggaaagttcccgttcacccgctcttcatgat
ggctttgaggtgaaaagaaaaggagataaggagtttactgcaatagtaagactagagatg
aattatgtacctgagaaattcaaactttcaccagctctccatgaagttctgggaattgag
gtagagacccgacccagaattatagctgctatttggcactatgtcaaggccaggaagttg
cagaacccgaatgaccctactttctttgtgtgtgatccatctcttcagaagatttttggg
gaagagaagatgaagttttcgatggtttcacaaaagatatcacagcatttaactccacca
cagcctatacatatagagcataagataaaactttcaggaaattgcccagctggaactacc
tgctatgacatactggttgatgtacccatggtattagagaaagagatgtctgctttctta
ggaagcaccgagaggagcaaagagattgacgcttgtgatgaattgatttgtgcatccata
aaaaaaatccatgaacatcgacggcggcgagctttctttcttgggttcagtcaatctcct
gcagagtttattaatactttgattgcttcccagagcaaggatctcaagcttgttgctgga
gatgctagtcgtaacgcggaaaaggagcgccgctccgatttctacaatcaaccttgggtt
gaggatgctgttattcgttacttgaaccgaaagtcagccggaagtgatgctcccggaagc
acgtga
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