Pyrus x bretschneideri (Chinese white pear): 103950083
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Entry
103950083 CDS
T03446
Name
(RefSeq) autophagy-related protein 16-like
KO
K17890
autophagy-related protein 16-1
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
103950083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pxb04131
]
103950083
03029 Mitochondrial biogenesis [BR:
pxb03029
]
103950083
Membrane trafficking [BR:
pxb04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
103950083
Others
Specific organelles associated proteins
Auto phagosome
103950083
Mitochondrial biogenesis [BR:
pxb03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
103950083
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR90_beta-prop_4th
ATG16
Beta-prop_VPS8
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_WDR41
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_SCAP
NBCH_WD40
Beta-prop_ACSF4
Beta-prop_WDR35_TULP_N
Beta-prop_Aladin
Beta-prop_IFT122_1st
Beta-prop_HPS5
Beta-prop_NWD2_C
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_WDR19_1st
WDR54
eIF2A
Beta-prop_Nup120_160
Cytochrom_D1
Beta-prop_Vps41
B-prop_COPA_B_2nd
KNTC1_N
Fib_alpha
PEP5_VPS11_N
Helical_CED_Drosha
Ge1_WD40
Beta-prop_RIG_1st
V-ATPase_H_C
HMMR_N
Motif
Other DBs
NCBI-GeneID:
103950083
NCBI-ProteinID:
XP_009359515
LinkDB
All DBs
Position
Unknown
AA seq
509 aa
AA seq
DB search
MSQEEIAREAIKHALKALRRRHLVEEGAHAPAFIALSKPILHQGSEWKEKAENLEMELQQ
CYKAQSRLSEQLVVEVAESRTSKASLQEKEAAVADLQKELSEKRDECSQLVADLEEKIKA
LELVVSENKEIRAQLEEMSIRAKNAEAENKVLVDRWMLEKMKDAERLNEANALYEDMIQR
LRASGLEKLARQQVDGVVRQSEEGAEYFVESTIPSTCKNRIPAHDGGCASILFEYNSGKL
ITGGQDGSIKMWDTNTGSLTRTLNGCIGSVLDLTITHDNRSIIAASSSNKLYAWDVNLGR
VRHTLTGHMDKVCAVDVSKFSSRHVVSAAYDRTIKVWDLQKGYCTNTIMFPKNCNAVSFS
MDGQTICSGHVDGNLRLWDIEKGKLLSEVAAHSNAVTSISLSRNGNVILTSGRDNVHNLF
DMRSLEVCGTLRATGNRVASNWSRSCISPDDNYVAAGSADGSVYIWSILKADIVSTLKEH
TASVLCCSWSGHGKPLASADKNGIICTWT
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaggaggagattgcgagggaagcaataaaacacgctctaaaggctctgcggcgg
cggcatttggtggaagaaggtgctcatgcaccagctttcatcgctctttcgaagccaatt
cttcatcagggttcagaatggaaggagaaagcggagaatctggaaatggaacttcagcag
tgttacaaagctcaatctcggctgtcagagcaacttgtggtggaagtagcggagtccaga
acttcaaaagcttcacttcaagagaaagaagcagcagtggctgatcttcagaaggaatta
tctgaaaaaagggatgaatgttctcaattagtggctgacttggaagagaaaattaaagct
ttggaattggttgttagtgagaacaaggaaataagagcgcagctagaagaaatgtctata
agagctaagaacgctgaggctgaaaataaggtgttagttgaccgctggatgttggagaag
atgaaggatgcagaacgccttaacgaggcaaatgcactctatgaagatatgattcagcgg
ctcagggccagcggtttggaaaaacttgctaggcagcaagtagatggtgttgtccgccaa
agtgaagaaggtgctgagtactttgtggagtcaaccattccctccacatgcaagaatagg
atccctgcccatgatggtggctgcgcttccatattatttgagtacaattctgggaaattg
attactggtggacaggatgggtccatcaaaatgtgggatacaaatactgggtcactaact
cgtacactcaacggttgcattggttcggttctggatctcacgattactcatgataataga
tctatcattgcagcaagcagctctaacaaattgtatgcctgggatgttaacttggggagg
gttcgacatactctcactggccacatggataaagtgtgtgcagtagatgtcagcaaattc
tcaagccgtcatgttgtgagtgcagcttatgatcgtaccataaaagtttgggatttgcag
aaaggttactgcaccaatacaatcatgttcccgaaaaactgcaatgctgtgtcatttagc
atggatggacagaccatatgttctggccatgttgatggaaatcttcgtttgtgggatatt
gagaaaggaaaactcctcagtgaagtagctgcacactcaaatgctgttacatccatatct
ttgtcccgaaacggcaatgttatactgaccagtgggagagacaatgtccataatttgttt
gatatgcggtctctagaagtctgtggaacgttaagagccactggaaacagagtagcgtcg
aattggagtagatcctgtatcagtccagatgacaattacgttgctgctggatctgctgac
ggttctgtgtatatttggtcaatattgaaagctgacattgtgagcactctgaaggaacac
actgcatcggtcctgtgttgttcatggagcgggcatggaaagcctctggcttctgcggac
aagaatggaatcatctgtacttggacgtga
DBGET
integrated database retrieval system
