Pyrus x bretschneideri (Chinese white pear): 103950188
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Entry
103950188 CDS
T03446
Name
(RefSeq) THO complex subunit 5B
KO
K13174
THO complex subunit 5
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03013
Nucleocytoplasmic transport
pxb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103950188
09122 Translation
03013 Nucleocytoplasmic transport
103950188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxb03019
]
103950188
03041 Spliceosome [BR:
pxb03041
]
103950188
Messenger RNA biogenesis [BR:
pxb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
103950188
Spliceosome [BR:
pxb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
103950188
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
103950188
NCBI-ProteinID:
XP_009359637
LinkDB
All DBs
Position
Unknown
AA seq
813 aa
AA seq
DB search
MEDDEIEEGMLVEEDAAPPPPKKPGKSPYEMLQEGKFSVEDIVTKMLTIKKEAKPKSELR
ELVTQMFLNFVTLRQANRSILLEEDRVKAETESAKAPVDLTTLQLHNLMYEKSHYVKAIK
ACKDFKSKYPDIELVPEEEFFRDAPADIKEPTLSNDAGHDIMLKRLNFELHQRKELCKHH
EKLEIHKKGLLETIANRKKFLSSLPSHLKSLKKASLPVQNQLGLQHTKKLKQHHAAELLP
PPLYVVYSQFMAQKEAFDEQIELDIVGSVKDAQAFAHKQANKETGISTNVETSREDDALD
EEDDGQRRRKRPKRAPVKQNLEQSGLYQVHPLKIILHIYDDEVSDPKSAKLITLKFEFLL
KLNVVCVGIEGSNDAAENNTLCNLFPDDTGLELPHQSAKLVVGDTLAFDEKRTSRPYKWA
QHLSGIDFLPEVAPLLAAPETPSGDTAKSDAVISGLSLYRQQNRIQTVVRRIRSRRKAQM
ALVEQIESLMKLKWPSVSCESVPWALHTPLCKLHGFSPVGPPPNVASSLPVLDKEQGQEP
MDVDLVGRSGSSKEELESVREDGELPSLVPAASIANVSKLAHHKGASLDHSRRPSLLSKT
PPISKAKSLSYKKPDEDLDLLLDTESDQDEPARVLEEENLASVECFEMAGTSWVDFGVRE
YCLVLTRRVDRDKRNMKLEAKIKISMEYPLRPPYFALSLSTISGENSKESDDYECFNELR
AMEAEVNLHMVKMLPQSEENNILAHQVCCVAMLFDYYMDEASPSSEKRRSTSVVDVGLCK
PVSGQIVARSFRGRDRRKMISWKDMECTSGYPY
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgacgagatagaggaggggatgctggtggaggaagacgcagctccgccgccg
ccgaagaagccgggaaaatccccgtacgaaatgcttcaggagggcaagttctcagtggag
gacatagtgacgaagatgctcaccatcaaaaaagaagccaagcctaaatcggaactccgc
gagctcgtcactcagatgtttctcaacttcgtcaccctccgccaggcgaatcgttcgatc
ttgctcgaggaggaccgcgtgaaagcggagacggagagtgcgaaggcgccggtggacttg
acgacgctgcagctccacaatctgatgtacgagaagagccactacgtgaaggccattaaa
gcttgcaaggacttcaagtctaagtacccggacattgagctggtcccggaagaagagttc
tttcgcgacgccccggccgatatcaaggagccgacgctgtcgaatgatgcagggcacgac
attatgctcaagaggctcaatttcgagctccaccagcgcaaggagctctgcaagcatcat
gagaagcttgagattcataagaagggtctgttggagacgattgccaatcggaagaagttc
ttgtccagtcttccttcgcacttaaagtccctaaagaaggcttctttgccggtgcagaac
caattggggcttcagcataccaagaagctcaagcagcatcacgctgcagagttgcttccg
ccgcctctgtatgtagtttactcgcagttcatggcgcagaaggaggcatttgatgaacag
attgagttggatatagtggggagtgtgaaggacgctcaagcttttgcccataagcaagca
aataaggagactggcatttcgaccaatgtagagactagtagggaggatgatgcactggat
gaggaagatgatgggcagagaaggagaaagcggccaaagagggctccagtcaagcaaaac
cttgaacagtctggactgtatcaagttcatccgctgaaaatcatccttcatatttatgat
gatgaggtttctgatcccaagtctgcaaaacttatcaccctcaagtttgagtttttgttg
aagttgaatgtggtatgtgttggaattgaaggatccaatgatgcagcggaaaataacacc
ttatgcaacctattcccagatgacactggccttgagcttccccatcagtcagccaagctc
gttgtgggtgatactcttgcatttgatgaaaagagaacttcccgtccgtataagtgggcc
cagcatttatcgggaattgatttcttgcctgaggtggcacccttgcttgctgcccctgaa
actccaagtggtgatacagctaaaagtgatgctgttatatctggtctgtcactttaccgc
cagcagaaccgaatacagacagttgtgcgaagaattcgctctcggagaaaagctcagatg
gctcttgtggaacagattgaatcacttatgaagcttaaatggccgtctgtgtcttgtgaa
agtgttccatgggctttgcatacccctttgtgcaaattgcatggtttttcacctgttggg
cctccacctaatgtggcatcatctttgcctgtcctagataaggagcagggtcaggagcct
atggatgtcgatttggttggacgatctggttcttcaaaggaagagctggagagtgtcaga
gaagatggggaacttccatctttagttccagctgcatccattgccaatgttagtaaactt
gctcaccataaaggagctagtcttgaccactccagacggccgtccttactttcaaaaaca
cctccaatcagcaaggccaaatcgctaagttataagaaaccggatgaagatttagatctt
cttctggatacagagagtgatcaggacgaacctgcacgtgtgctagaggaagaaaattta
gcgtctgttgaatgctttgagatggctggaacgtcatgggtggattttggggtcagagaa
tattgtcttgttttaaccaggagagttgacagggataagaggaatatgaagttagaagcc
aagattaagatcagcatggagtatccattaaggcctccctattttgcactcagtcttagc
actatatctggagaaaactctaaagagagcgatgactatgagtgcttcaatgaacttcgt
gcaatggaagcagaggtcaatctgcacatggtgaagatgttacctcaaagtgaagaaaat
aatatcttagctcatcaggtttgttgtgtggcaatgttattcgactattacatggacgaa
gcatccccatcttctgaaaagagacggagcacttctgttgttgatgttggcttgtgcaag
cctgtcagtggtcagattgttgccagatcatttagaggaagggatcgcaggaagatgata
tcctggaaggacatggaatgcacttcaggctatccttactag
DBGET
integrated database retrieval system
