Pyrus x bretschneideri (Chinese white pear): 103950256
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Entry
103950256 CDS
T03446
Name
(RefSeq) sm-like protein LSM1B
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103950256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxb03019
]
103950256
Messenger RNA biogenesis [BR:
pxb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103950256
mRNA degradation factors
5'-3' decay
Lsm complex
103950256
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
103950256
NCBI-ProteinID:
XP_009359721
LinkDB
All DBs
Position
Unknown
AA seq
128 aa
AA seq
DB search
MSWAGAEDTFLSTSLATYLDKKLLVLLRDGRKLLGLLRSFDQFANVVLEGACERVIVGDL
YCDIPLGLYVIRGENVVLIGELELDKEELPPHMTLVPEAEIKRAQKAERDATDLKGSMRK
RMEFLDFD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgggctggagcagaagatactttcctttccacttctcttgcaacctatctcgac
aaaaagcttcttgtattattgcgagatggacgaaagttgttgggattgctacgatctttt
gatcagtttgctaatgttgttcttgaaggcgcatgtgaacgagtaattgtgggtgacctt
tattgtgacatcccattaggtctgtatgttatccgtggggagaatgtcgtcttaattggg
gagctggaattggataaggaagagcttcccccgcatatgactttggtaccagaagctgag
ataaaaagggctcagaaagcagagagggatgcaacagatttaaagggctccatgagaaaa
agaatggagtttctcgattttgattaa
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