Pyrus x bretschneideri (Chinese white pear): 103950287
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Entry
103950287 CDS
T03446
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3 isoform X1
KO
K14829
pre-rRNA-processing protein IPI3
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pxb03009
]
103950287
Ribosome biogenesis [BR:
pxb03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
103950287
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
EIF3I
Beta-prop_EML
Beta-prop_TEP1_2nd
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
Beta-prop_HPS5
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_IFT122_1st
Beta-prop_IP5PC_F
Beta-prop_VPS8
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_BBS7
WDR54
Beta-prop_WDR75_2nd
PROPPIN
PALB2_WD40
HTH_20
Ge1_WD40
VPS8_N
LZ3wCH
DUF465
Motif
Other DBs
NCBI-GeneID:
103950287
NCBI-ProteinID:
XP_009359755
LinkDB
All DBs
Position
Unknown
AA seq
442 aa
AA seq
DB search
MELVVTSSSVEAGIGCWDLRTGAEQLRYKLCASPPHGLICVGERFLASSQLREPSASSGS
VQYWSWSKPQVDVKSFPEEPINPLAANSEGTYIVGGGSSGNIYLWEVNTGRLLKKWHAHY
RGVSCLAFSDDGSLLISGSEDGGIRVWSLIGLFDDYQSQQESHLYMHNFTEHTLCVTDVV
TGYGGCKAIIVSASQDRTCKVWSVGSGRLLRNIVFPTIIDAIALDPGENVFFAGGRDGKI
YVAALNAESPLNSKYGLHIIDCFSNHSKAVTCLAYGITGNYLLSGSEDGVVRVWDARTHN
IVRVFKHAKGPVNNILVVRQHFSQMNSYASSRRHGSSLPPPLEKYTTEEGGDIRAFLGGP
ATCSNLTEPLYITEQVMNRQIKELQQQGSASAEMEIERLKRENERATQMAQQWRKMYDNL
HRFCVNELLDGDQGGVSNGNAA
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggagctggtggtgacctcgtcgtctgtcgaagccggcatcggctgttgggacctccgc
accggcgccgagcagctccgctacaagctctgcgcttctccgcctcatggcctcatttgc
gtcggcgaacgattcctcgcctcctctcagctccgtgagccttctgcctcctctggctct
gtacagtactggtcttggtccaagccgcaggttgatgtgaagagcttcccagaagaaccg
atcaatccgctcgctgcgaacagcgaagggacgtacattgttggcggtggctcatcgggg
aatatctacttgtgggaggttaatactggtagactgcttaagaaatggcatgctcactac
agaggtgttagttgcttggcattttcggatgatggctccctgctgatttcggggtcggag
gatggaggcattagagtttggtctcttataggattatttgatgattatcaaagtcaacag
gaaagccatctgtacatgcataattttacggagcacactctttgtgtaacggatgttgtc
acaggatatggtggatgcaaagccattatcgtgtcagcatcacaggatcgcacatgtaag
gtttggagtgtaggaagtgggagattattgagaaatattgttttccctactataattgat
gcgattgcactggatcctggtgaaaatgtcttctttgccggtggtagagatggcaagata
tacgttgctgcacttaatgctgagagcccacttaacagcaagtatgggttgcatatcatc
gattgtttctcgaatcacagcaaagctgttacttgcctagcatatggcattactggaaat
tatttgctttctggatcagaagatggcgtcgttcgagtttgggatgctagaactcataac
attgttcgtgtgttcaaacatgcaaaaggtccagtgaataatattctagtcgttcgacag
catttttctcagatgaattcgtatgcgtcctcgagaaggcatggttcatcattaccacct
ccactggaaaagtatacaacagaggaaggcggagacattagagctttccttggaggcccg
gctacttgcagtaatttgacagaaccattgtacatcactgaacaagtgatgaataggcaa
atcaaagagcttcagcaacaaggatctgcctcagccgaaatggagattgagagactgaag
cgcgaaaatgaaagagccacacaaatggctcagcagtggagaaaaatgtatgacaacttg
catcggttctgtgtaaatgagcttttggatggcgatcaaggaggagtctcaaatggaaat
gcagcttga
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