Pyrus x bretschneideri (Chinese white pear): 103950867
Help
Entry
103950867 CDS
T03446
Name
(RefSeq) probable pectate lyase 3
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb00040
Pentose and glucuronate interconversions
pxb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103950867
Enzymes [BR:
pxb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
103950867
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
103950867
NCBI-ProteinID:
XP_009360393
LinkDB
All DBs
Position
Unknown
AA seq
452 aa
AA seq
DB search
MAAMFNSSYFFLCLFFLSFAAFVSSNDGSTDVANEDTMVLDLDAYWKERAQEALKEAMES
YHKNPEQAAEEFHTGVAELLSKENTTRRNLRGNKGYNGPCMATNPIDACWRCDANWANNR
KKIVGCAQGFGKKATGGKDGPIYVVTVGTDNDVQNPKPGTLRHAVIQKGPLWIIFARSMV
IRLEQELMVTSDKTIDGRGANVVIEEGGGITLQFVKNVIITNLHIKMIVSKPGGMIRDSV
DHMGLRTKSDGDGISLFGASNVWIDHVSMSRCADGLIDAVMASTAITISNSHFTDHDDVM
LFGANNAHTQDKIMQITLAFNHFGQGLVQRMPRVRHGFFHVVNNDYTHWIMYAIGGNMNP
TIISQGNRFIAPANAATKQVTHREHTPESEWKNWEWRSEGDLMMNGAFFVESGSGASQHP
AKLDMMPFQPGTFATKLTKFSGALNCVVGKPC
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgatgtttaactcgtcctatttctttttatgtttgtttttcttatcctttgct
gcatttgtttcgagtaatgatggttcaaccgatgttgcaaatgaagatactatggtatta
gatttagatgcgtactggaaagaacgagcccaagaagccttaaaggaggccatggaaagc
taccataaaaatcctgagcaagccgctgaggagttccatactggagttgctgagcttttg
tccaaggaaaacaccacaagaaggaacttgaggggtaacaagggttataatggtccatgc
atggcgaccaatccaattgacgcctgctggaggtgtgacgctaattgggccaataaccga
aagaagattgtaggctgcgcccaaggctttggtaaaaaggccaccggaggtaaggacggt
cccatttacgtggtgactgtgggcacagataatgacgtacaaaaccccaaacccggaacc
ctacgccacgccgtgattcagaaagggcctttgtggataatcttcgcaagaagcatggtg
attaggctggagcaagagctgatggtgaccagtgacaagaccattgatggtagaggagcc
aatgttgtgatagaagagggtggtggcattaccctccagtttgtgaagaatgtaatcatc
accaaccttcacatcaaaatgattgtgtccaaacccggtggtatgatcagggactccgtc
gaccacatgggtttgaggaccaagagtgacggcgatggtatctccctctttggtgcctcc
aacgtctggatcgaccacgtttccatgtcccggtgcgcagatgggctcatcgatgccgtc
atggcttccaccgccatcaccatctccaactcccacttcactgaccacgatgatgtgatg
ttgtttggcgccaacaacgcgcacactcaagacaaaatcatgcaaattactttggccttc
aaccactttggtcagggactggtgcagaggatgccgagggtccggcacggattcttccac
gtggtgaacaacgactacacccactggatcatgtatgccatcggaggaaacatgaaccct
accatcatcagccagggtaacaggttcattgctcccgcgaacgcggccaccaaacaggtg
acccatagggagcatacaccagagtcagagtggaagaactgggaatggagatctgaggga
gatttgatgatgaatggagctttctttgttgaatctggatcaggagccagccaacaccca
gcaaagttggacatgatgcccttccaaccagggacctttgccacaaagctcacaaaattt
tccggcgctctaaactgcgttgtcggcaaaccctgctag
DBGET
integrated database retrieval system
