Pyrus x bretschneideri (Chinese white pear): 103950989
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Entry
103950989 CDS
T03446
Name
(RefSeq) nipped-B-like protein B
KO
K06672
cohesin loading factor subunit SCC2
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pxb03036
]
103950989
Chromosome and associated proteins [BR:
pxb03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
103950989
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PHD
PHD_2
PDS5
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
103950989
NCBI-ProteinID:
XP_018503850
LinkDB
All DBs
Position
Unknown
AA seq
1800 aa
AA seq
DB search
MSYPVVTSSSSSGSAHGGISLSNTVHSEVAPCLPLPSLPVFCGASDHLRLFDEPNRPDAA
VASRIADLLRETDVSYLNLREDAGAVPYGYGEPLKLHDVVLQYNPEAFEYNSPGPIKGQV
PVSSTVADKKPFKPSIPILKPSQRDYSVSDNNQLNDIPPNDISTPSSRKPKSKKKASDVM
SSVAPDSAEIQDAAIRSFCELVEEFCGRAEIISDDREETEWLSMPLSDLRVLANEIMSLR
AKKLLHLVPVDTFVRLLRILDHQIHRAEGLTIIEYEQSNSDVVSSIQCALEAIHAALAVM
AHNQMPKQLYKEEIIERILEFSRHQIMDVMCAYDPSYRALHRPSQNGLLEVEEDEEPDAE
FGSASKKRRSIKTVKVQKSSFNRVSAAVNNILQKMCTILGLLKDLLLIERLSDGCILQLV
KTCFTTFMVDNIQLLQLKAMGLISGIFYSYTQHRTYVIDELIQLLWKLPVSKRALRAYHL
PDEEQRQIQMITALLIQLVHYSANLPETLRQESSSNSILELSVNADYPTKGHEAATEACC
HFWTRVLQRFAGAKTQEASELKVMMENLVTDLLTTLNLPEYPASAPILEVLCVLLLQNAG
LKSKDVAARSMAIDLLGTIAARLKRDSLVCSRDKIWILQELVSDDGVDQTYPRDACSVCL
DGRVEKNVFVCQGCQRMFHADCMGVREYEVPNRSWHCQICLCRKQLLVLQSYCKSQCKDE
GIKDRSRSGRNTEVAFSITKPEVVQQMLLNYLQDTTSADDGQLFVRWFYLLLWYKDDSKS
QQKFMYYLARLKSKEIVRDSGTGFSLLTRDSVKKITLALAQKNSFSRGFDKILHLLLASL
MENSPVIRAKALRAVSIIVEADPQVLGDKRVQSAVEGRFCDSAISAREAALELVGRHIAS
HPDVGLKYFEKVAERIKDTGVSVRKRSIKIIRDMCVSNANFSEFTSACIAIISRISDDES
NIQDIVCKTFYEFWFEEPTGSQTQFFGDGSSVPLEVAKKTEQIVEMLRRMPSHQPLVTVI
KRNLALDFFPQSAKAVGINPASLASVRKRCELMCKCLLEKILQVEEMNIQEVERRALPYV
LALHAFCVVDPKLCAPASDPSQFVVTLQPYLKSQADNRVVAQLVESIIFIIDAVLPLVRK
LPQAVVEELEQDLKNMIVRHSFLTVVHACIKCLCAVSKVAGKGAAIVENLIQVFFKRLDA
QAVDNKQQVGRSLFCLGLLIRYGNSLPSNSDKTIDVVSSLSLFKKYLLAEDFVIKVRSLQ
ALGFVLIARPKYMLEKDIGKIVEATFSSSSDVRLRMQALQNMYDYLLDAESQMGTDAASD
NVIHYNVEGGNAVSVAAGAGDTNICGGIVQLYWDNMLARCLDLNEQVRQSAIKIVEVVLR
QGLVHPITCVPYLIALETDPLEANSKLAHHLLMQMNEKYPAFFESRLGDGLQMSFTFIQS
ISTSSEHENKKVQAKASGNAKGKSDSVSLAQGRLGVSRIYKLIRANRTSRNKFMSSIVRK
FDNASWTPSVVPFLMYCTEILALLPFTTPDEPLYLVYSINRVVQVRAGALEAKLKALTLH
LLQRGASHGNGIIEDGSAARPLTGGMASLDLNGTVQQEPVFQPVINYMSTEWNGTLQQEP
AYQSVSNQATPFEANMHVTGSSSSGGFSIDDVQKFQADCLAAIAVQLLLKLKRHLKIVYS
LNDARCQAFSPGEPPKPGEVLSRQNVPFDLSDTHTNLPTTYQELVQRYQEFKNALREDTI
DFSTYTANIKRKRPAPRKGRKSVAGDDEGDDDDEDYSGGARRPSNIGRRGGYSVRSRQRL
NT seq
5403 nt
NT seq
+upstream
nt +downstream
nt
atgagttatccggtagtcacttcgagctcgagctccggctcggctcacggaggcatcagc
ctctccaacacggtgcactcggaggtcgcgccttgcttgcctctcccatcgctgccggtg
ttctgcggcgcatctgatcacctccggctgttcgacgagccgaaccgccctgacgcagct
gttgcgagtaggattgctgatctgcttcgagaaaccgacgtgtcgtacttgaaccttagg
gaggatgctggggcagttccatacggttatggagaacctttaaaacttcacgatgtagtt
cttcagtacaatccagaagcctttgagtacaatagtccaggtcctattaaggggcaagtg
cctgttagtagtacggtagctgacaagaagcccttcaagcctagtatacctatactaaag
ccttctcaaagggactattccgtatctgacaataatcagctcaatgatattcctcctaat
gacatatctacaccatcttctagaaaacccaaatccaagaaaaaagctagtgatgttatg
tcatcagtggcaccagattctgctgaaattcaagatgccgccatcagaagcttttgtgag
ttggtggaggagttctgtggcagagctgaaattatcagtgatgatcgggaagaaactgag
tggttatctatgcctctttcggatcttagagtgcttgcaaatgaaataatgtctcttcga
gcaaagaagcttctacatttggttcctgtagatacttttgttagattgttaaggatttta
gatcatcagatacatcgagctgaaggcttgactataattgaatatgagcagtcaaattca
gatgtggtttcatcaatacaatgtgcactggaggccattcacgcagcattagcagtaatg
gctcataaccagatgccaaaacaactatataaagaagagatcattgaaagaattctggag
ttttccaggcatcagataatggatgtcatgtgtgcttatgatccatcatatcgtgctttg
cataggccaagtcaaaatgggttgctcgaagttgaggaagatgaagagcctgatgctgaa
tttggctcagcaagcaagaagagacgcagtatcaagaccgtgaaagtgcagaaatcctca
tttaacagggtctctgctgctgtgaataatattcttcagaaaatgtgcaccattcttggt
ttactcaaggatttgttgttaatagaaaggttatcagatggttgtatcttacaactagtg
aaaacatgcttcacaacatttatggtggataatatccagctcttgcaactgaaggccatg
ggtttgatcagtgggatattctattcatacactcagcatcgcacatatgtgatagatgaa
ttaattcagttgctttggaagttgccagtctcaaagcgagctttgagagcctatcaccta
cctgacgaagagcaaaggcagattcagatgatcactgctttgctgattcagttggttcac
tatagtgcaaaccttcctgaaacattaaggcaggaatcaagtagtaattctatcttagaa
ctctctgtcaatgccgattatccaactaagggtcacgaggcagcaacagaggcatgttgt
cacttttggactcgtgtacttcagcgctttgctggtgcaaagactcaggaagcttcagag
ttgaaagtaatgatggagaatcttgttactgatctcttgacaacattgaatttacctgaa
tatccggcttcagctcctattctggaggttctttgtgtcttgttacttcagaatgctggg
ctgaaatctaaagacgtagctgcacgttcaatggctatagaccttcttggcacaattgct
gcgagattgaagcgtgattctctcgtttgcagtagggacaaaatctggatacttcaggag
ttggttagtgacgatggggttgatcagacatatccaagagatgcatgctcagtttgttta
gatggtagggttgaaaaaaatgtctttgtttgtcaaggttgtcagagaatgtttcatgct
gattgtatgggagtgagagaatatgaagttccaaatcgaagttggcactgtcagatatgc
ctctgcaggaagcaacttcttgttttacaatcctactgtaagtcacaatgcaaagatgaa
ggaataaaggatcgaagtcgttcaggaagaaacactgaagttgctttttcaattacgaag
cctgaggtagtccaacagatgcttttgaattaccttcaagataccacatcagctgatgat
gggcagctctttgttcgctggttttatctcttgttgtggtacaaggatgattcgaaatca
cagcagaagttcatgtactatcttgctagactgaaatcaaaagaaatagttcgggattct
gggactggtttttcattattgacaagggattcagtcaagaaaattactttagcattggca
caaaaaaactccttctccagagggtttgataagattcttcatttgcttttggcaagctta
atggagaattctcctgtgatcagggccaaggctttacgagcggtcagtatcattgtagaa
gctgatccccaggttttaggagacaaacgtgttcagtcagctgttgaaggaaggttttgt
gattccgcaatttccgctagagaagcagcactggagcttgtaggaaggcatattgcttct
catcctgatgttggtttgaagtattttgagaaggttgctgagagaattaaggataccgga
gtaagtgttcgaaagcgatctatcaaaatcatacgagatatgtgcgtttcaaatgcaaac
ttctccgaatttacaagtgcttgcatcgctatcatctcccgtattagtgacgatgaatca
aacatacaggatattgtttgcaagacattttatgagttctggtttgaggaacctactggt
tcacaaactcaattctttggagatggtagctctgttccattggaggtggctaaaaaaacc
gaacagatcgttgagatgttgaggaggatgccaagtcaccagcctcttgtgacagtcatt
aaacgcaacttggcccttgatttttttccacaatcagctaaagctgttgggatcaaccct
gcctcacttgcatcagtacgcaagcgctgtgagttaatgtgcaagtgcttactggaaaag
atattgcaggtagaggaaatgaatatccaggaggtagagaggcgggcacttccgtatgtg
ctagctttgcatgcattctgtgttgtggatccaaagctttgtgcgccggcttctgaccct
tcacagtttgtggtcactcttcagccttatctaaagagtcaggctgataatcgagtggtt
gcacaattagtggagagtataatctttataattgatgctgttcttccgttggtaagaaag
ttaccacaagctgttgtggaagaacttgaacaggacttaaagaacatgattgttcggcat
tccttcttgaccgttgttcatgcttgcataaagtgcctgtgtgctgtgagtaaagtggca
ggaaagggtgctgctatagtggagaatcttatccaggtgttcttcaaacgtttggatgct
caggcagtagataacaagcagcaagtggggcgatctcttttctgtcttggattgcttatc
cgttatggcaactctttgcccagtaactccgacaaaacaattgatgttgttagcagtctc
agcttgtttaaaaaatatcttctagcggaggattttgtaataaaggttcggtcattgcag
gcattgggctttgttctaatagctaggcccaaatatatgttggaaaaagatattgggaag
atagtagaggcaacattctcttctagctctgatgttcgccttaggatgcaagcattgcaa
aacatgtacgactatcttcttgatgccgaaagtcaaatgggaacagatgcggctagtgat
aatgtgattcattataatgtggaaggcggcaatgctgtatctgttgctgcaggtgctgga
gatactaatatctgtggtggtatagttcagttgtattgggataacatgttggcaagatgt
ttagaccttaatgaacaagttcgccaatctgcaattaagattgttgaagttgtactgcgg
caggggctcgtacatcctattacatgcgttccataccttattgctctcgaaacagatcca
ctggaggccaattcgaagttagctcatcatttgctgatgcaaatgaatgaaaagtaccct
gcatttttcgaaagccgcctgggagatggccttcaaatgtcttttactttcatacagtcc
attagtactagttctgaacatgagaacaaaaaagttcaagcaaaggcttctggaaatgcg
aagggaaaatctgatagtgtttctctcgcacaaggcagacttggggtttctcgaatctac
aagcttattcgtgctaaccggacttcaagaaacaaatttatgtcttcgattgttcgcaag
tttgataatgctagctggacaccttcagtagtccctttcctgatgtactgcacagaaata
cttgccttgctacccttcacaacaccggatgagccgctttatttggtctattctataaat
agagtagtacaagttagggctggggcactcgaagcaaagctgaaagctctgactttgcat
ttgttacaaagaggtgcatctcatggcaacggcataattgaagatggctcagctgctcgg
cctcttacgggagggatggcatcattggacttgaatgggacagttcaacaagaaccagtg
tttcaacctgttataaattatatgtcaacggagtggaatggtacattacaacaagagcca
gcatatcagtctgtctccaatcaagctaccccgtttgaggcaaacatgcatgttacgggc
tctagcagttccggtggcttctcaatagatgacgtacagaaattccaggcggactgcctg
gcagctattgcagtgcagcttcttttgaaactgaagagacacctaaaaattgtgtatagc
ctgaatgatgcaaggtgccaggctttttctccgggtgaaccccctaaaccgggagaagta
ctctcgaggcagaatgttccttttgacctcagtgatacgcacaccaatttgcctacaact
tatcaagaattggtacaaagatatcaggaattcaagaatgcattgagggaggatacgatt
gatttctctacttacactgcaaacatcaagagaaaacgcccggccccaagaaaaggacgg
aaatctgtggctggagacgatgagggcgatgatgatgatgaggattattcaggtggggct
cggaggccgagtaatattggaaggagaggtggctacagtgtcagaagtcgacagcggtta
tag
DBGET
integrated database retrieval system
