Pyrus x bretschneideri (Chinese white pear): 103951543
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Entry
103951543 CDS
T03446
Name
(RefSeq) autophagy-related protein 13a-like
KO
K08331
autophagy-related protein 13
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
103951543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pxb04131
]
103951543
03029 Mitochondrial biogenesis [BR:
pxb03029
]
103951543
Membrane trafficking [BR:
pxb04131
]
Autophagy
Autophagosome formation proteins
ULK complex
103951543
Atg1 complex
103951543
Mitochondrial biogenesis [BR:
pxb03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
103951543
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
103951543
NCBI-ProteinID:
XP_009361230
LinkDB
All DBs
Position
Unknown
AA seq
617 aa
AA seq
DB search
MDFQNNSQLESGKMEQIVSQFLLKSLHIVLDSRIPSLHPHDRSGDLSSATQVRRSDKWFN
LILGDRPAALENLNFWHRSVMDPMIIDIILVRGGPSSSVDNLYANTVEGTSVETIIERWV
VQYETPRAVAPQTGDSSASYKKTYKKSIILLRTLYSYMRLLPAYRIFRQLSTSSQTYNFD
IIYKVSSLRDPFSRAEEELMEEFSFAPVEAHPGRLSLSVNYRPMLADFNLEPSAPMPPRI
ITDYVGSPAADPLRSFPSSGKGFSATSFLSRGARPPSSVPHQRPHSWTSGFHRPPPFIHN
RPLVGSPPAYRASPMSHDVGSPPIDTFANRGQNYRPLSHKRNMSSDEYQLSPPFSPSPSP
SPPAYLSSGNFNPMQTRIRSGTAPVSIPLPMGGPRYLSPNFSDPSRNSLPPLSPRSTRND
HSSQESPSGIRAIRKLEVSRAGETHPGSSNHYIGQKVMKDSKDDSGRFSGLLSSSGSPRV
GFSRSSSRLSFQDDLDDFEFSCPFDVDDVDTPDSQASDGKRPSEFISQSLPMGRKSQDAA
VGVLVQMLRTAPPLRQDSSCYSSQSGKNEHEGGVATASGFFMPRKTSDALEELRSYRDMK
DLLLSKSGTRVLAKDES
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggactttcagaataattctcagctcgaatcggggaaaatggaacagattgtttcccaa
tttctattgaaaagcttgcatattgttttggactctaggattccttctcttcacccacat
gatcgcagcggtgacctgtcatctgcaactcaagtgagaaggagtgacaagtggtttaac
ttaatactaggagaccgccctgcagctcttgagaatttaaatttttggcacagaagtgta
atggatcctatgataattgacattatacttgttcgcggaggacctagttcttctgttgac
aatctgtatgcgaatacagtggaggggacatctgttgagacaatcatagagaggtgggtt
gtccagtacgaaactccaagggctgtggctccccaaactggtgactcttcagcctcttac
aaaaagacatacaagaagtcaatcattcttttacgtactctttattcgtatatgagactt
cttccagcttataggatcttcagacagctaagtacatctagtcagacttacaattttgat
attatctacaaggtgtcttcacttagagatcccttctcaagggcggaggaggaattgatg
gaggagttcagttttgctcccgtagaggctcatcctggccgcctttctttatctgtgaat
taccgtccaatgctagctgatttcaatcttgagccttcagcaccaatgccaccgaggata
attactgattatgttggtagtcctgccgctgaccccctgaggtctttcccctcatcaggg
aagggttttagtgcaacttcctttctgtcgagaggagcacgaccgccatccagtgtgcca
caccaacgcccacacagctggacaagtggcttccacaggccacctccttttattcacaat
agacccttagttggatctccacctgcatatcgtgcatctcctatgtcacatgatgttgga
tctcctcctattgatacatttgccaacagaggtcaaaactatagacctctaagtcataaa
agaaatatgagttcagatgagtatcagctttcacctccattttcgccatccccgtcgcca
tcacccccagcatacttgtccagtggtaatttcaatcctatgcaaactcgaattcgttca
ggaactgcccctgtaagcatcccccttccaatggggggccctagatacttatcccccaat
ttttctgatccaagtagaaattctcttcctcctttatcacccagaagcacaagaaatgat
cattcctctcaagagtctccatctggaatcagggcaatcagaaagttggaggtttcaagg
gccggagagactcaccctggaagttcaaatcattacattggtcagaaggtgatgaaagac
agcaaagatgattcagggcgtttctcaggattgttgtcatctagtggctcaccacgtgtt
ggattttctagaagctcgagtagattgtctttccaggatgatttggatgattttgagttc
tcatgtccgtttgacgtggatgatgttgatacaccagattctcaagccagtgatggcaaa
aggccttcagagttcatatctcagtcactgccaatgggtagaaaatcacaagatgctgct
gtcggcgttctggttcagatgctgaggacagctccgcctctgcgccaagattcaagttgt
tactcatcccagtctgggaagaatgagcacgagggaggagttgctacggcttctggtttc
tttatgccgcggaagacatccgatgcactggaggagctcagaagctaccgagatatgaaa
gaccttctactctccaagagcggaacgcgggtgcttgccaaagacgaatcataa
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