Pyrus x bretschneideri (Chinese white pear): 103951859
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Entry
103951859 CDS
T03446
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03082
ATP-dependent chromatin remodeling
pxb03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103951859
03083 Polycomb repressive complex
103951859
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pxb03036
]
103951859
Chromosome and associated proteins [BR:
pxb03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
103951859
Histone modification proteins
HAT complexes
HATB complex
103951859
HDAC complexes
Sin3A-HDAC complex
103951859
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
103951859
PRC2.2
103951859
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
103951859
Heterochromatin formation proteins
Other heterochromatin formation proteins
103951859
Chromatin remodeling factors
NuRD complex
103951859
NuRF complex
103951859
NuRF complex (fruit fly)
103951859
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF12
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_SPT8
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
eIF2A
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
103951859
NCBI-ProteinID:
XP_009361600
LinkDB
All DBs
Position
Unknown
AA seq
500 aa
AA seq
DB search
MDAQSQQQAGPVKKKETRGRKPKPKEEKKDDHQQQAKLKKSQQNATVDDKYTQWKSLVPI
LYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANCEIVKPRV
AAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNTKIVATHTDSPDVLIWDVEAQ
PNRHAVLGATTSRPDLILTGHQDNAEYALAMCPTEPYVLSGGKDKTVVLWSIQDHIAAST
TDPAANKSPGSGASIIKNSKSGDGNDKATDGPTVAPRGIYYGHEDTVEDVAFCPSSSQEF
CSVGDDSCLILWDARVGSSPAVKVEKAHDADVHCVDWNPHNDNLILTGSADNSVRVFDRR
NLTSDGVGAPIYKFEGHSAAVLCVQWCPDKSSVFGSSAEDGLLNIWDYDKVGKERTPKGP
TSPPGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPEE
EVLAELEKFKSHVVSCTSKP
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggacgctcagtcgcagcagcaagctggaccagtgaagaagaaggagactcggggccgg
aagcccaagcccaaggaagagaagaaggacgaccaccaacagcaagccaagctcaagaag
tcgcagcagaacgccacagtcgacgacaagtacactcagtggaagtccctcgtccccatc
ctttacgactggcttgccaaccacaacctcgtctggccctccctttcttgccggtggggt
cctcagctcgagcaagctacttacaagaatcgccagcgtctgtacctttccgagcagacc
gatggcagtgtcccaaatactctggttattgcaaattgtgagattgtcaaacctagagtc
gccgctgcagagcatatatctcagttcaatgaggaagcccgctcaccatttgtgaagaag
tacaagaccatcattcatcctggagaggtaaacagaatcagagaacttccacagaacact
aagatagtggccacgcataccgacagtcctgatgttctaatttgggatgtcgaagctcaa
cctaaccgtcatgctgtcctaggagctacaacctcgcgtccagatttgattttgactgga
catcaagataatgcagaatatgcccttgcaatgtgtccaactgagccctacgtgctctct
ggagggaaggacaaaacagtggtgttgtggagtattcaggaccatatagcagcctctacc
actgatccagcagcaaacaagtctccaggatctggtgcatcaatcattaaaaactcaaag
tctggggatggtaatgataaagctactgatggtcctactgttgctcctcggggaatctac
tatggacatgaggatacagtcgaagatgtggcgttttgcccatctagttcacaggagttc
tgtagtgttggtgatgattcttgcctcatattatgggatgcacgtgtcggctctagccct
gctgtaaaggttgaaaaggctcatgatgctgatgttcactgtgttgattggaatccccat
aatgataaccttattctaacagggtcagcagataattctgtacgcgtgtttgatcgtcgg
aatctcacttctgatggagtgggggcacccatatataaatttgagggtcattcagcagct
gttctctgtgttcagtggtgtccagacaaatcgtctgtctttggaagttctgcagaggat
ggtcttttaaacatttgggattatgataaggtcggtaaggagcgaactccaaaaggccca
acttctccacctggcttgtttttccagcatgctgggcacagggacaaggttgttgatttt
cattggaatgcatctgatccatggactgttgtcagtgtttctgatgactgtgatagtact
ggcggagggggcacattgcagatatggagaatgagtgatctgatctacaggcctgaagag
gaggttctggcagagcttgagaagttcaagtcccatgttgtttcctgtacttcaaagcct
tga
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integrated database retrieval system
