Pyrus x bretschneideri (Chinese white pear): 103951918
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Entry
103951918 CDS
T03446
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A-like
KO
K07466
replication factor A1
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03030
DNA replication
pxb03420
Nucleotide excision repair
pxb03430
Mismatch repair
pxb03440
Homologous recombination
pxb03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103951918
03420 Nucleotide excision repair
103951918
03430 Mismatch repair
103951918
03440 Homologous recombination
103951918
03460 Fanconi anemia pathway
103951918
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pxb03000
]
103951918
03032 DNA replication proteins [BR:
pxb03032
]
103951918
03400 DNA repair and recombination proteins [BR:
pxb03400
]
103951918
Transcription factors [BR:
pxb03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
103951918
DNA replication proteins [BR:
pxb03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
103951918
DNA repair and recombination proteins [BR:
pxb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
103951918
MMR (mismatch excision repair)
103951918
DSBR (double strand breaks repair)
HR (homologous recombination)
103951918
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF936
zf-like
Motif
Other DBs
NCBI-GeneID:
103951918
NCBI-ProteinID:
XP_009361680
LinkDB
All DBs
Position
Unknown
AA seq
646 aa
AA seq
DB search
MPVNLTPNAITAMIGGDVNLKPLVQVVDIKLIGTQERYRFMVSDGVSCQHAMISSQLNDR
IKTNRVQIGSVVQLTEYISTVLQNRQVIVVLNMETIILNSDMIGNPKPYGPPDSAAQNVL
RNGSVQRSAGNHMISQNPVHNVQNLRPTSHSERLSVRPRLHPQSSPHDGPNFRATVQPPY
QPPPQYKNHGPIMKNEAPARIIPINALNPYQGRWAIKARVTAKGDPRRYNNAKGDGKVFS
FDLLDSEGGEIRVTCFNAVLDRFYDIIEVGRVYLISKGSLKPAQKNFNHLKNDWEITLDA
SSTVDLCPDEDGSIPAQNFNFRPISEIENAENNSIVDVIGIVISVNPSVPIMRKNGMETQ
RRILNLKDRSGKSVELTLWGDVCNREGLKLEEMLASGFSPVLAVKAGKINDFSGKSVGTI
HSTQLFINPDISDARTLRDWFDRGGKDTASVSISKDIVPGGTKNEIRKTVSQIRDEGLGR
SVKPDWVTVKGTISFIKTDSFCYTACPLMIGDRQCNKKVSRSGNRGWQCDRCNQEFEECD
YRYLLQAQIQDHTGLTWATAFQEAGEEILGCSAKELYLLKYEEQDELRFGDIVRSSIFNQ
FLFKFKVKEEMYGDEQRVKITVVKADKVNYSSESSYMLDMISKHSR
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgaacctgacgccgaacgccatcacagcgatgataggcggcgacgtgaatttg
aagccgttggtgcaggtggtcgatattaagctcatcggcacgcaggagagataccgtttc
atggtctccgacggcgtttcgtgccagcatgccatgatctcttcgcagctcaacgaccga
atcaagaccaaccgagtccagataggctccgtcgtccagctcaccgagtacattagcacc
gtcctccagaaccgccaggttattgttgtgctgaacatggaaactatcatactgaactcc
gacatgattgggaatccaaaaccatatggcccacctgattcagctgctcaaaatgtgttg
cgtaatggcagtgttcagcggtcagctggtaatcatatgatttcgcaaaatcccgttcac
aatgtgcagaatcttagacctacttctcattctgagaggctgagtgtcagacctcgtctt
catcctcaaagctctccacacgatgggccaaattttcgagctactgttcagcctccttac
caaccacctccacagtacaaaaatcatggcccaatcatgaagaacgaggcaccagcacgg
atcattcctattaatgctctgaatccttatcagggaagatgggctatcaaggcaagggtt
acagcaaaaggggatccccgtcggtataataatgctaaaggagatggtaaagttttctct
tttgacctccttgactctgaaggaggggaaatacgagttacctgcttcaatgctgttctt
gaccgcttctatgatattattgaggttggcagagtttacttgatttcaaagggaagcttg
aaacctgcccagaagaatttcaaccatctgaagaatgactgggagataactttggatgca
agttcaactgtggacctctgccctgatgaagatggttccataccagcgcaaaacttcaac
ttcaggccgattagtgaaattgaaaatgctgaaaataattctattgttgatgttattggt
attgtgatatctgtcaatccttctgttcctatcatgaggaagaacggtatggaaactcag
agaagaattctgaatctaaaggatcggtcaggcaagagcgttgagctaaccctttggggg
gatgtctgcaacagggaaggtctaaagcttgaagagatgttggcttctgggttttcccca
gttttagccgttaaagctgggaagattaacgatttcagtgggaagtccgttggaacaatt
cattctacacagctatttataaacccagatatttctgatgctcgtaccttgagagattgg
tttgaccgagggggcaaggatactgcttctgtctccatttctaaagacattgttccagga
ggaactaagaatgagatacgcaaaactgtttctcagatcagggatgaaggtcttggaaga
tcagttaagccagactgggtcacggtgaaggggacgatatcttttattaaaacagattct
ttctgttacacagcttgtccgttgatgattggggataggcagtgcaacaaaaaggtgtcg
aggtcaggaaacagaggatggcaatgtgacagatgcaatcaagaattcgaggagtgcgac
tacagatatctccttcaagcccaaattcaagaccacactggattgacttgggcgacagct
tttcaggaagccggggaagagatcttaggttgctcagcaaaggagctgtacttgttgaag
tacgaagagcaggatgaattaagatttggagacatagtccggagcagcatctttaatcag
tttctgttcaagtttaaagtcaaagaagagatgtatggcgatgagcagagggtgaagatc
accgtggtgaaggcagataaggtgaactattcttcagaaagcagttacatgcttgatatg
atttcgaagcactctaggtaa
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