Pyrus x bretschneideri (Chinese white pear): 103951992
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Entry
103951992 CDS
T03446
Name
(RefSeq) serine/arginine-rich splicing factor SR45-like isoform X1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03013
Nucleocytoplasmic transport
pxb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103951992
03015 mRNA surveillance pathway
103951992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxb03019
]
103951992
Messenger RNA biogenesis [BR:
pxb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
103951992
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_ACIN1
RRM_occluded
Nup35_RRM_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
103951992
NCBI-ProteinID:
XP_009361782
LinkDB
All DBs
Position
Unknown
AA seq
399 aa
AA seq
DB search
MAKPTRARRSPSGSVSGSSSRSRSRSYSGSDSLSSSRSRSRSRSRSFTSSSSPYRSGSSR
SRSPPASKKSPEVARRGRSPPPQSKKASPPPRKASPVHQSLVLHIDALTRNVHEGHLREI
FCNFGEVVNVELAMDRTVNLPKGFGYVEFKTRADAEKAQLYMDGAQIDGNVVRAKFTLPQ
RQKVSSPPKPVATAPKRDGVKTDGASADKDAPRRPREASPRRRGVPSPRRRSPVGRRGES
PRRPLDSPPRRRAASPARPYRHGGSPPRKRLASPPRGRSGSPPPRRRSPVRRIRGSPIRR
RSPGPPRRRSPPRRFRSPPRRSPIRRRTRSPIRRPGRSRSRSISPRRGRGPATRRGRSSS
SGSPSPRKAPRRISRSPRRPLRGRSSSKSSTSSSPPRKP
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagccaacccgagcccgtcgctcgccatctggctccgtgtccggctcatcctcc
cggtcccgttcccgctcctactcaggctccgactccctctccagctcgcgttctcgctct
cgatctcgctccaggtccttcacctcttcctcctctccgtaccggagcggcagctctcgc
agccgaagtccccctgcctccaaaaaaagtcctgaagttgcaagacgaggtcgttctcca
ccaccacaatctaaaaaggcgtcaccgcccccaaggaaagcttctccagttcatcagtca
cttgttcttcacattgacgcgcttacgaggaacgtgcatgaaggccatttacgagaaata
ttctgtaactttggtgaagttgtcaatgtggagctggcaatggatcgtactgttaacctt
ccaaaaggatttggatatgttgagttcaaaacacgagcagatgctgaaaaagcacaatta
tacatggacggcgctcaaatcgatggtaatgtcgttcgagcaaagtttacattacctcaa
cgtcagaaggtgtcttctcctcctaagcctgttgccactgctccaaagagagatggtgtg
aaaactgatggtgccagtgctgacaaagatgcaccaaggcgaccaagggaagcttctcct
cgtcggagaggtgttccctcaccacgaaggagatcacctgtcggtcgaagaggtgaatct
ccaagacgaccattagattctccaccacgtcgtcgtgctgcctcgcctgctcgtccctac
cgccatggtggttcacctccaaggaaaaggcttgcatctccacccagaggtcgttctgga
tcgccgccaccaaggcgacgttcccctgttagaaggatacgaggcagtcccattcgtaga
cgctctccaggacctccaaggcgccgttcacctcctagacggtttcgtagtcctcccaga
aggtctccaattcgtaggcgtacccgttctcccattcgtaggcctggtagatcccgttca
aggtcaatctcgccgcggaggggtcgaggaccagctactagacgtgggagatcatcgtca
tctggatcacctagtccacgaaaggcaccccgaagaatctctcgcagtccgagaaggcct
ttgaggggaagaagcagtagcaagagcagcaccagcagttcaccccctcgtaagccatag
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