Pyrus x bretschneideri (Chinese white pear): 103952213
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Entry
103952213 CDS
T03446
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb00040
Pentose and glucuronate interconversions
pxb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103952213
Enzymes [BR:
pxb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
103952213
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
103952213
NCBI-ProteinID:
XP_009362042
LinkDB
All DBs
Position
Unknown
AA seq
446 aa
AA seq
DB search
MAVFESKKKWVGAFVTVLLVCCFAAAMVSEISRNSNGGTEELQSSSNSSMEARVAEDEEG
FNKHAVEDPEEIASMVDMSIRNSTERRKLGYFSCGTGNPIDDCWRCDPNWHKNRKRLADC
GIGFGRNAIGGRDGRFYVVTDPNDDDPVNPRPGTLRHAVIQTKPLWIVFKRDMVIQLKQE
LIMNSFKTIDGRGVNVHIANGACITIQYVTNIIIHGLHIHDCKPTGNALVRSSPTHFGWR
TMADGDAVSIFGSSHIWVDHNSLSNCADGLVDAVMGSTAITISNNHMTHHNEVMLLGHSD
SYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQG
NRYAAPTNPFAKEVTKRVETATTQWKNWNWRSEGDLLLNGAYFTPSGAGASASYARASSL
GAKSSAMIGAITSGSGVLPCRRGHPC
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtttgagagtaagaagaaatgggtcggtgcgttcgtgacggtgcttctcgtg
tgttgcttcgcagctgctatggtctccgagatctctcgcaacagcaatggaggaacagag
gagttgcagagctcgagcaactcgtcaatggaggccagagtggctgaggatgaagaagga
ttcaataagcatgcggttgaagacccagaagagattgcttccatggttgacatgagtatc
cgcaacagcacggagaggaggaagctcggctacttctcgtgtggaactggcaatccaatc
gatgactgctggcgctgtgatcccaactggcacaaaaaccgcaagcgtcttgcagactgt
ggcattggttttgggagaaatgccattggtggccgcgatggacgcttctatgttgtcact
gaccctaatgatgatgatcctgttaaccccaggcctggtactcttcgccatgctgtcatc
cagaccaagcctctctggattgtgttcaagcgagacatggtgatacagttgaagcaggag
ctcatcatgaacagcttcaagaccattgatggtcgcggagtcaatgttcacattgctaat
ggagcatgcatcacaatccaatatgttacaaatattatcatccacggcctgcacatccat
gactgcaagcccactggcaatgctttggtgaggagctcgcctactcactttgggtggcgg
acaatggctgatggagatgctgtctccatcttcgggtcaagccatatttgggttgatcac
aattccctctccaactgcgctgacggcttagttgatgctgtcatgggctcaactgcaatt
accatttccaacaaccacatgacccaccacaatgaggtgatgcttctgggccacagtgat
agctataccagagacaagcaaatgcaagtcacaattgcttacaaccactttggagaggga
cttatccaaagaatgccgaggtgcaggcacgggtatttccatgtcgtgaacaatgactac
actcactgggaaatgtatgccattggtgggagtgcagaacccaccatcaacagccaaggc
aacagatatgctgctccaaccaacccctttgcaaaggaggttacaaagagggtcgagacg
gctaccacgcaatggaagaactggaactggagatcagaaggagatctgctgctcaatggt
gcctacttcactccatctggagctggagcttcagcaagctacgccagggcctcaagcttg
ggagccaagtcatctgccatgattggagctataacttcaggttccggtgtacttccctgc
cgcagaggccacccctgctag
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