Pyrus x bretschneideri (Chinese white pear): 103952360
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Entry
103952360 CDS
T03446
Name
(RefSeq) coatomer subunit alpha-1-like
KO
K05236
coatomer subunit alpha
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pxb04131
]
103952360
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pxb04147
]
103952360
Membrane trafficking [BR:
pxb04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
103952360
Exosome [BR:
pxb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103952360
Exosomal proteins of bladder cancer cells
103952360
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
TPR_COPA_B
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_SPT8
NBCH_WD40
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Zn_ribbon_19
Motif
Other DBs
NCBI-GeneID:
103952360
NCBI-ProteinID:
XP_009362204
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
SSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCALFHPKEDLVVSASLDQTVRVWDIGALRKKTVAPADDIMR
LSQMNADFFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQLKLWRMNDTKAWE
VDTLRGHMNNVSCVLFHSRQDIIVSNSEDRSIRVWDATKRTGLQTFRREHDRFWILSAHP
EMNLLAAGHDSGMIVFKLERERPAFSVSGDSMYYVKDRFLRFYEFSTQRDSQVIPIRRPG
SSNLNQGAKTLSYSPTENAVLIGSDTEGGSYELYIIPKDSFGRGDTVQEAKRGIGGPAVF
VARNRFAVLEKSTNQVIVKNLKNEIVKKSALPIVADAIFYAGTGNLLCRAEDRVIIFDLQ
QRIIVGELQTPFVRYIVWSNDMESIALLGKHSIVIANKKLVHQCTLHETIRVKSGAWDDN
GVFIYTTLNHIKYCLPNGDSGIIRTLDIPVYITKVYGNTLHCLDRDGKNRAIVVDATEYV
FKLSLLKKRYDQVMSMIRSSELCGQAMIAYLQQKGFPEVALHFVKDERTRFNLALGSGNI
QIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLVTGNLDKLSK
MLKIAEVKNDVMGQFHNALYLGDIRERVKILENAGHLPLAYSTAVIHGLHDIAERLAAEL
GDNVPVLPKGKSPSLLIPPTPIICGGDWPLLRVMRGIFEGGLDNVGKNVEEEYEEATDAD
WGEDLDIVDVDKIPNGDISAVLDDEEAHEENEEEGWDLEDLELPPEIDTPKTASNARSSV
FVAPTPGMPVSQIWSQKSSLAAEHAAAGNFDIAMRLLSRQLGIKNFDPLRQLFLDLHMGS
HTYLRAFSTAPVLTVAIERGWSESATPNVRGPPALVFKFSELEEKLKVGYKATTQGKFAD
ALRLFLGILHTIPLIVVDSRREVDEVKELIIIVKEYVLGLKMEIKRKELKGDPVRQQELA
AYFTHCNLQIPHLRLALLNAMSVCYKAGNLNTAANFARRLLETNPSVENHAKTARQILQA
AEKNMTDATQLNYDFRNPFVVCGGTYVPIYRGQKDVSCPYCSSRFVPDHEGKICTVCDLA
VVGSDASGLLCSPTQIR
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgaaattcgagaccaagagtaatcgggtgaaagggctgagctttcaccccaag
cggccatggatcttggccagtctccacagcggtgtgatccagctctgggattaccgaatg
ggcactctcatcgaccgttttgacgagcacgatggccctgtacgtggcgtccatttccac
tcctctcagccgcttttcgtctccggaggggatgattacaagatcaaggtatggaattac
aagttgcataggtgtttgtttacacttcttggacaccttgattacatccgaaccgttcaa
ttccatcatgagtacccgtggattgttagtgcgagtgatgaccagacaattagaatatgg
aattggcagtcccgaacttgtatttctgtgctcactggacacaaccattacgtcatgtgt
gccttattccatccaaaggaggatcttgttgtctcagcatcattggatcaaactgttcgt
gtttgggatattggtgccctaaggaaaaagacggttgccccagcagatgatatcatgcgc
ttgagtcagatgaatgcagatttctttggtggagttgatgctgttgtgaagtatgttttg
gaaggtcatgatcggggtgtgaattgggcatcatttcatcctacactccctctgatcgtc
tctggagcagacgatcgacaattgaaactttggcggatgaatgatacaaaggcttgggaa
gtggacactctaagggggcacatgaacaatgtatcctgtgttctattccattcaaggcag
gatattattgtgtccaattccgaggataggagtatccgagtctgggatgcaacaaaacgg
actggtcttcagacatttcgtagggagcatgataggttctggattctttcagcacatcct
gaaatgaacctcttggctgctgggcatgatagtggcatgattgtctttaaattggagagg
gagcgtcctgctttttctgttagcggtgattccatgtactatgttaaagatcgttttctc
cgcttctatgagttctccacccagagagacagtcaagttatcccaattcgaaggcctggt
tcttccaacttgaatcaaggggcaaaaacactatcttacagccctactgaaaatgctgtt
ttgataggttcagatacggaagggggttcttatgaactatacattatacccaaagatagc
tttggtcggggtgatactgtgcaggaggcaaaaagaggaatcggaggcccagctgtgttc
gtggctcgcaataggtttgcagtgcttgaaaagagcaccaaccaagttatagttaaaaat
ctgaaaaatgagattgtcaagaagagtgccctacctattgttgctgatgcaatattttat
gctggaactggaaacttgctctgcagggcagaggacagagtcattatttttgacctgcag
cagagaattattgttggagagcttcaaactccttttgtaaggtatattgtttggtcaaat
gacatggagagcattgctttacttggcaaacattcaattgtgatagccaataagaagctt
gtgcatcagtgcactctccatgagacaattcgtgtaaagagtggagcttgggatgacaat
ggtgtcttcatatatacaaccttgaatcacatcaaatactgccttcctaatggggatagt
ggaatcatcaggacccttgacattcccgtgtatataacaaaagtgtatggaaacacctta
cattgcttggatcgagatgggaagaaccgtgccattgttgttgatgcaacagaatatgtt
ttcaagttatccttactgaagaaaaggtatgaccaggttatgagcatgattaggagttct
gagctctgtggccaggccatgattgcatatctacagcagaaaggtttccctgaagttgct
cttcattttgtgaaggatgagaggactcgcttcaacttggcactagggagtgggaacatc
cagattgctgttgcttctgccaaggaaattgatgagaaagatcactggtatcgattggga
gtggaggccctacgtcagggtaatgcaggcattgtagaatatgcgtatcagaggacaaag
aattttgagaggctatcattcctatatcttgtgactggaaacttggataaattgtccaaa
atgctgaaaattgctgaagtcaagaatgatgtgatgggtcagttccacaatgctttgtat
ttgggtgatatcagagaacgtgttaagatcttggagaatgcgggtcatttacctcttgct
tatagcacagctgtaatccatgggctccatgatattgctgaacgtttggcagctgaactg
ggagataatgttcctgttttacccaaggggaaatctccctctcttttgatacctccaacg
ccaatcatctgcggtggagattggcccttgttgagggtcatgagaggaatatttgagggt
ggtcttgataatgtggggaagaatgttgaggaagagtatgaagaggctacagatgctgat
tggggagaggatttggatattgttgacgtggacaagattccaaatggagacatcagtgca
gtgctggatgatgaggaagcacacgaggaaaatgaggaggaaggatgggatcttgaagat
cttgaacttccacctgagattgatactccaaaaactgccagcaacgcccgttcttctgtg
tttgttgccccaactcctggtatgcctgtaagtcaaatctggtcccagaaatcatctctg
gctgctgaacatgctgcagccgggaatttcgatattgcaatgcgtttgttgagcaggcag
ctgggtataaaaaactttgatcccttaagacaattatttctcgatttacacatgggcagt
catacgtatctacgtgccttctcgacagctcctgtgcttaccgtggccattgagagggga
tggagtgaatcagctactcctaatgttaggggtcctcctgctcttgtatttaaattctct
gagctagaagagaagcttaaggtgggttacaaggccacaacccaagggaaatttgctgat
gctttacgtcttttccttggtattctgcatactattcctctgattgtagttgattcaagg
agagaggttgatgaagtaaaagaattgataatcattgtaaaggagtatgttctgggtttg
aagatggagattaagaggaaggaacttaaaggcgatccggttcgccaacaggagctggca
gcgtacttcacccactgcaaccttcagatccctcacttgaggctagcattactaaatgcc
atgagtgtttgctataaggctggtaatctcaacacggcagctaactttgccaggcgactt
ttggagaccaaccccagcgttgaaaaccatgcaaagaccgcaagacaaatcctgcaagct
gccgaaaagaacatgactgatgcaacccagctaaactatgacttcagaaacccatttgtg
gtttgtgggggaacatacgtgcctatttaccgtggacagaaggatgtgtcatgcccgtac
tgcagctctcggtttgttcctgaccatgaaggaaagatctgtactgtttgtgatcttgca
gtggttggatcagatgcatctggtttgctctgttctcctacccagataagatga
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integrated database retrieval system
