Pyrus x bretschneideri (Chinese white pear): 103952408
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Entry
103952408 CDS
T03446
Name
(RefSeq) uncharacterized protein LOC103952408
KO
K14315
nucleoporin NDC1
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103952408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxb03019
]
103952408
Messenger RNA biogenesis [BR:
pxb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103952408
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
103952408
NCBI-ProteinID:
XP_009362275
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
MPPPASATPPEMVLHNRFLGFLIWQSIPSTVIFFLFKTLSSVVSSASPSADKPPFTFPFA
PSIFALITFLTFHLSQLLFSFSLSLVASPHPHRPASLLQLALGLVRFLFVPGGSDSSETA
DSRARAKLSVRFLMFLGAAAVSGFVSVASLCGGFGDGVSAIGRVGFRGFMMGLLYGLYYV
YNRRWVLEFPIIQRPPFFSFKMGLPSAITRSLQLSFVAYLFSAALLVFLPHHIQNQTTTG
KFIAEQIRFYIGSFLVFLCWELSHHLHRLLHTKRFVFAPPKGSAAAETNPSEILLAALEE
SSPNSLLQYLAYLDLCMVCENNVDAWRRAAFFEETGETYKRVISVCLRPLEQLASKLGEG
LESSIETGSQISNQLLSPTDNRIDSKYSEALNNFQLYAWCAWTAASLTACSHKEDRYGVA
QISGSNAAVMSTLISCLLAVETYMGKKTTLQSANQFMGSTGFKLRNSSMANTGTSKKRAG
PLHSKAYAVADVLRNSIYQIVSAFHDQMASSAKKGFLDKDWIINSKPPFGPRELLVQKLR
LFLDFRAS
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgccgcctccagcttcggcgacgccgccggagatggtgctccacaaccgcttcttaggg
ttcctcatatggcaatccatcccctccaccgtcatcttcttcctcttcaaaaccctctca
tcagtcgtctcctccgcttccccctccgccgacaagcccccattcacattcccgttcgcc
ccatcgatatttgcccttattacgtttttgaccttccacctctcccagctcctcttctcc
ttctcactctccctcgtcgcctcgccacacccccaccgccccgcctctcttctccagctc
gctctcgggctcgttcgcttcctttttgtaccgggtggctccgattcgtcggagacggcc
gattcccgtgcccgggctaaactttcggtgcgtttcctgatgtttttgggcgcggcggcg
gtgtcggggtttgtttcggtggcgtcgttgtgtggggggtttggcgatggggtttctgcg
attgggagagtagggtttaggggttttatgatgggtttgctttatgggctgtactatgtg
tataatcgcaggtgggtcttggagtttcccattattcagcgtcctccctttttcagcttc
aaaatggggcttccttcagctatcacacgatccttgcagctttcctttgttgcgtacctg
ttttcagctgcactgctagtgtttctgccccaccacattcagaaccagactacaactgga
aagtttattgccgagcagatcaggttttacattgggagtttcttagtgtttctctgctgg
gaactaagtcaccatttacatcggctgcttcacacaaagagattcgtatttgcgccacct
aaaggatcagcagcagcagaaacaaatccaagtgagattctccttgcagctctggaggag
agcagtcctaattctcttcttcagtatcttgcatatcttgatctctgtatggtttgcgag
aataatgtggatgcttggagaagagctgcattttttgaggaaactggtgaaacgtacaaa
agagttatatctgtatgcttgcggcctctggagcagcttgcatcaaagctaggtgaaggc
ttggaaagttccattgaaaccggctcccaaatatccaatcagttactgtccccaactgac
aaccgaatagactcaaaatactctgaagctttgaataacttccagctatatgcatggtgt
gcgtggacagctgcctcactgactgcatgctcacacaaagaggacagatatggggttgcc
cagatctctggtagtaatgctgctgtaatgtccacactgatttcttgccttcttgctgtt
gaaacatacatggggaagaagaccactttgcagtctgctaatcagttcatggggtcaact
ggttttaaattgagaaactcgagcatggctaatactggcacaagcaaaaagagagccggc
ccgcttcattcaaaagcatatgctgttgctgatgttctgaggaactcgatctaccagatt
gtgtctgctttccatgatcagatggcaagcagtgctaaaaagggctttcttgacaaggat
tggatcattaacagcaagcctcctttcggaccacgcgaacttcttgtgcagaaactgcgt
ctattccttgactttcgagccagctaa
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