Pyrus x bretschneideri (Chinese white pear): 103952984
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Entry
103952984 CDS
T03446
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103952984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxb03019
]
103952984
03009 Ribosome biogenesis [BR:
pxb03009
]
103952984
04131 Membrane trafficking [BR:
pxb04131
]
103952984
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pxb04147
]
103952984
Messenger RNA biogenesis [BR:
pxb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
103952984
Ribosome biogenesis [BR:
pxb03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
103952984
Membrane trafficking [BR:
pxb04131
]
SNARE
SNARE associated proteins
Others
103952984
Autophagy
Aggrephagy
Other aggrephagy associated proteins
103952984
Exosome [BR:
pxb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103952984
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_5
AAA_22
AAA_14
AAA_33
NPHP3_N
TIP49
RNA_helicase
AAA_28
AAA_17
Parvo_NS1
Mg_chelatase
nSTAND3
AAA_18
IstB_IS21
AAA_7
ABC_tran
AAA_24
Viral_helicase1
ATPase_2
NACHT
AAA_lid_PRS2_C
DUF815
TsaE
Vps4_C
Sigma54_activat
NB-ARC
ResIII
SLFN-g3_helicase
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
103952984
NCBI-ProteinID:
XP_009362967
LinkDB
All DBs
Position
Unknown
AA seq
819 aa
AA seq
DB search
MAPPSPSAPDRSQPSSSSDPKSNKKDFSTAILERKKSPNRLVVDEAVNDDNSVISLHPAA
LEKLQFFRGDTVLIKGKKRRDTICIIIADDECEESKIRMNKVVRANLRVRLGDVVSVHPC
PDVKYGKKVHILPIDDTIEGVTGSLFDAYLKPYFVESYRPMRKGDLFLVRGMMRSVEFKV
METDPAEYCIVAPDTEIFCEGEPVKREDEERLEDVGYDDVGGVRKQMAQIRELVELPLRH
PQLFKSIGVKPPKGILLYGPPGTGKTLIARAVANETGAFFLLINGPEIMSKMAGESESNL
RKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGA
TNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKRMKLADDVDLERVAKDTHGF
VGADLAALCTEAALQCIREKMDVIDLEDETIDAEVLNSMAVTNEHFQTSLSSTNPSALRE
TVVEVPNVSWDAIGGLDNVKRELQETVSMPVEHPEMFEKFGMSPSKGVLFYGPPGCGKTL
LAKAIASECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQR
GNSVGDAGGAGDRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIP
LPDEASRLQIFKACLRKSPISKAIDLAALARYTHSFSGADITEICQRACKYAIREDIEKD
IERERRKNANPEAMEKDEIDEVAEIKPAHFEESMKYARRSVSDADIKKYQLFAQTLQQSR
GFGSEFRFPAQQTENNAGEAALSPFSSALVAGDEADLYD
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctccgagtccatctgctcctgatcgttctcagccctcttcgtcttcggacccg
aaaagcaacaagaaagatttttcgactgctatcttggaacgaaagaagtctcctaatcga
cttgttgtcgatgaagctgtcaatgatgataattctgtgatttccttgcaccctgctgca
ctggagaagcttcagtttttccgcggagacactgttttaattaagggcaagaaaaggaga
gacacaatttgcatcattattgccgatgatgaatgcgaggaatcgaaaatcagaatgaac
aaagttgtgagagctaatcttagggttcgccttggagatgttgtgtctgttcatccctgc
cctgatgtcaagtatggaaagaaggttcacatccttccaatcgatgatacaattgaagga
gtgacaggaagcttattcgatgcatatttgaagccatacttcgttgaatcttaccggcct
atgaggaagggtgatcttttcctggttcggggcatgatgcgaagcgttgagttcaaggtc
atggagacagaccctgctgagtactgcattgttgcgccagatactgagattttctgtgag
ggagagcctgtcaaacgtgaagacgaggaaagactagaggatgtgggatatgatgatgtt
ggaggtgttagaaagcaaatggcccagatacgcgagttagtagaactgcctcttagacat
ccgcagctcttcaaatcgattggagtaaaaccccctaaaggcattttactctatggccca
cccgggactggaaaaactttgattgcaagggctgtagcgaatgagactggagcgttcttc
cttttgattaatggacctgaaataatgtccaagatggcaggtgaaagtgaaagcaacttg
aggaaggcgtttgaggaagccgaaaagaatgcaccctcaatcatttttattgatgagata
gattctattgctccaaagagagaaaagacccacggtgaagtggaaaggcgtatagtttcc
cagctcctgactttaatggacggccttaagtcccgtgcgcatgtcattgtcatgggagca
acgaataggccaaacagcatcgaccctgctctgaggagatttggaagattcgatagagag
attgatattggtgtgccggatgaagttggaagattggaagttttacgaatccatacaaag
aggatgaaacttgcagatgatgttgatctcgaaagagttgcaaaagatacccatggtttt
gttggagcagatcttgctgctctctgcacagaggccgcactccagtgcatccgtgaaaaa
atggatgttattgatttggaagacgaaacaattgatgctgaggtgttgaattcgatggct
gtgacgaatgaacacttccagacctcgttgtcctctacaaatccttctgccttgcgcgaa
actgttgtggaggtaccaaatgtttcgtgggatgccattggtgggttggacaacgtcaaa
agagaacttcaagagactgtttcaatgcccgtggagcatccagaaatgtttgagaaattt
ggcatgtcgccttctaaaggcgttctcttttatggaccgcctggctgtgggaaaactctt
ctcgccaaggcaattgccagcgaatgtcaggccaacttcatcagtatcaaaggacccgag
ttgctaacaatgtggttcggagaaagtgaggcaaatgtgcgcgagatatttgacaaggct
cgccaatctgctccttgtgttctcttctttgatgagctagactcaattgcaactcagcgt
ggaaattctgtgggagatgccggtggtgctggagacagagtcttgaaccaacttctaact
gaaatggatggaatgaatgcaaagaaaaccgtctttatcattggggcaacaaacaggcca
gatattattgacccggcattgctcaggcctggacgtcttgaccaacttatctacatccca
ctcccagatgaggcttcgcgccttcagatttttaaagcatgtttgcgcaagtcccccatc
tctaaggctattgacctagcagctcttgcccgttatacgcacagttttagtggtgcagat
atcactgagatatgtcaacgtgcctgcaaatatgccatcagagaagacattgagaaggat
attgagagggaaagaagaaagaatgctaaccccgaagccatggaaaaagatgaaattgat
gaggtagccgagatcaagccagcgcactttgaggaatcaatgaaatatgcccgaagaagt
gtgagtgatgcagacatcaagaagtaccagctatttgctcagactttgcagcaatctcgt
gggtttggatccgaatttcggtttcctgctcaacagacagagaacaatgcaggagaagct
gctctatccccattttcttcagccctagttgctggagatgaagctgatctctatgattga
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