Pyrus x bretschneideri (Chinese white pear): 103954265
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Entry
103954265 CDS
T03446
Name
(RefSeq) serine/arginine repetitive matrix protein 1-like isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03013
Nucleocytoplasmic transport
pxb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103954265
03015 mRNA surveillance pathway
103954265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxb03019
]
103954265
03041 Spliceosome [BR:
pxb03041
]
103954265
Messenger RNA biogenesis [BR:
pxb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
103954265
Spliceosome [BR:
pxb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
103954265
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
103954265
NCBI-ProteinID:
XP_018504680
LinkDB
All DBs
Position
Unknown
AA seq
841 aa
AA seq
DB search
MSGGFFRGTSADQDTRFSNKQAKLLKSQKFAPELEHLVDMSKVSMDVMRPWIANRATELL
GFEDEVLINFIYGLLEGKVNGKEIQISLTGFMEKNTVKFMKELWTLLISAQNNASGVPQQ
FLDAKQEEARKKKEEADRFANEIQKKKEKERIDQQEMLKMEGGAGKKANNAALEPNTKHM
SPRDSNDRYEDERGAEKRNGVKARNKVSRSPNSENSSLSPRERHRSQSISKSPKASRRSI
SSESDRSPPRRPITTVRRHSPEGSISPRRRSPYSRQRSRSNSQQRSPSPYRRRVRSPYWR
RPSPVRRRRSPSPIRRHRSPSPVRRRRSPSPVRRRRSPSPVRRRRSPSPVRRRRSPSPVR
RRRSPSPVRRPRSPSPVRRRRSPSPVRRRRSPSPLRRCRSRSPVRRRSPSPVRRSYRRSP
LNTRDRYVSPLQHRSPVRSRRSPTPLHRSPSPHDRSSSPIQHDSPSPIRRTSKLRRSPSQ
SPQERTSVYRSLEKTSPVPHRSSSHGSLQRELKNGNDSRKRATDFLPSPERSRILSESQP
GVRNSSEERRRSLSSPDESPVGRPREQMTRNVSSSPPRKLREQLRRGSPDTSEDKPIVSP
AKVRNKEEYSKNRLGNKDFRNKEQEMKSGKSSGRGVPESPDQQHSPTIYKDSLHGEMQNP
NDGRKSDEKNRSHSKNSKDSDRHRKLGSVHSSVEKVDPSNRTGTVDSGSEESGKRRGGDK
GKRKNKRSERQEVTSEDDYSNDSEIDERKDAKRRRKEEKRSRKEKKRRRREERRRRKEER
RAEKLKGKNYSGASASDGEHVGRRELHSSDNEETEAVQKKLEIELRKKALESLKAKKGIS
H
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtgggttcttcaggggtacgtccgccgatcaggacactaggttttccaataag
caagccaagctactgaaatctcagaaatttgcgcctgaattggaacatttggtcgatatg
tcgaaggtgagtatggatgttatgcgcccgtggattgctaatcgggcaacggagcttctt
gggttcgaagatgaagttcttatcaactttatttatggtcttttggaaggaaaggtgaat
gggaaggaaattcaaatatcgcttaccggatttatggagaaaaatactgtgaagtttatg
aaagagctttggacgctgcttatcagtgcacaaaacaatgctagtggtgtacctcaacaa
tttttggatgccaaacaagaagaagcacggaaaaagaaggaggaggcagacaggtttgca
aacgaaattcagaaaaagaaagagaaggagaggatagatcaacaagagatgttgaagatg
gaaggaggggctggtaagaaagctaacaatgctgcattggagccaaacacaaagcatatg
tcaccaagggattcaaatgatcgttatgaggatgaaagaggagctgaaaagaggaatggt
gtgaaggcaaggaacaaggtttccagatctccaaattcagaaaattcatctttgtctcct
cgtgaaagacaccgatcacaaagtatttccaagtcgccaaaagcatcgagacgatccatt
tcttctgaaagtgatcgctctccaccaagacggcctattacaactgttcggaggcattca
cctgagggatcaatctccccgagaagaagatcaccttattccaggcaaagatctagatca
aattcccaacaaagatcaccctctccatatcggcgtagagtacgttctccatattggcgt
agaccctcacctgtccggcgccgcagatcaccctcacctatccggcgccacagatcaccc
tcaccagtcaggcgccgcagatcaccgtcccctgtgcggcgtcgcagatcaccgtcccct
gtgcggcgccgcagatcaccctcccctgtccgtcgccgcagatcaccctcccctgtccgt
cgccgcagatcaccctcgcctgtccggcgtcccagatcaccttcgcctgtccggcgtcgc
aggtcaccctcacctgtgcgacgtcgcaggtcgccctctcctttgcgacgttgcagatct
cgctcacctgtgcgtcgcagatcaccctcacctgtacgacggtcttatcgaagatcccca
ttgaatacacgggatcggtatgtgtctcccttgcagcataggtcaccagttcgtagcagg
aggtcaccaactcctctgcataggtctccgtctccgcatgatcgaagttcatctcctatt
cagcatgattccccttcgccaatcaggagaacatcaaagcttcgaagatctccctcacaa
tctcctcaagaaagaaccagtgtttacagatcccttgaaaaaacttctcctgtgccacac
cggtctagctcgcatgggtcattgcagagggaattaaagaatgggaatgattcgcgtaaa
agagcaacagatttcttgccatcaccagagaggtctcgcatactctcagaatctcaacca
ggcgtaagaaattctagtgaagaaaggagaagaagtttgtctagcccagatgagagtcca
gttggacgaccaagggagcaaatgactcggaatgttagctcaagtcctccaaggaaacta
agagaacaacttcgtcgtggaagtcccgacacaagtgaagacaagccgatagtttctcct
gctaaggttcgtaacaaggaagagtactctaagaatcgcctgggtaataaggacttcaga
aacaaagagcaggagatgaagagtgggaaatcttctgggaggggggttcctgaaagtcct
gatcaacaacattccccgaccatatataaggactctctacatggtgagatgcaaaatccc
aatgatggtagaaaatctgatgaaaagaaccgctctcattcaaaaaattccaaggacagt
gatcggcatcgcaaacttggatccgtgcactcatcagttgaaaaggttgatcctagtaat
cgaactggtactgttgattctggttccgaggaaagtggaaaacgcagaggtggggataag
ggaaaaagaaagaataagagatcagagaggcaagaagttacttcagaggatgattacagc
aatgattctgaaatagacgagaggaaggatgctaaaaggagaaggaaagaggaaaagaga
tcgaggaaggagaagaagcgccgaagacgtgaggagagacgtcgcagaaaagaagaacgt
cgtgcagagaagctgaaagggaagaattacagtggtgcttctgcttcagatggtgaacat
gtaggcaggagggagcttcattcaagtgacaatgaagagacggaggctgttcagaagaaa
cttgagattgagttacgcaagaaggctctcgaatcacttaaagcaaaaaagggcattagt
cactaa
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