KEGG   Pyrus x bretschneideri (Chinese white pear): 103954454
Entry
103954454         CDS       T03446                                 
Name
(RefSeq) WD repeat-containing protein 48
  KO
K15361  WD repeat-containing protein 48
Organism
pxb  Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pxb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    103954454
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pxb03400]
    103954454
DNA repair and recombination proteins [BR:pxb03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     103954454
SSDB
Motif
Pfam: WD40 WD40_Prp19 DUF3337 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML_2 Beta-prop_EML Beta-prop_CAF1B_HIR1 NBCH_WD40 Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_EIPR1 RAWUL WD40_MABP1-WDR62_1st Beta-prop_DCAF12 Beta-prop_DCAF4 ANAPC4_WD40 WD40_RFWD3 Beta-prop_WDR75_2nd MAGI_u5
Other DBs
NCBI-GeneID: 103954454
NCBI-ProteinID: XP_009364561
LinkDB
Position
Unknown
AA seq 761 aa
MHRVGSSGNTNNSTRPRKEKRLTYVLSDADDTKHCAGINSLSVLKGSVSGCDYLFTGSRD
GTLKRWTLAEGAATCSATFESHVDWVNDAVLVGYNTLVSCSSDTTLKTWNCMSDGACTKT
LRQHSDYVTCLASAEKNSNIVASGGLGGEVFVWDLEAALTPVAKSGESMEDDSSNAVNGS
GNAITSLRTISSSNCISMHSTQPHGYVPISAKGHKESVYALAMNDSGSLLVSGGTEKVVR
VWDPRTGSKKMKLRGHTDNIRALLIDSTGRFCLSGSSDSMIRLWDLGQQRCVHSYAVHTD
SVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLSTGEHPILQLALQDDSIWVATTDS
SVHRWPAEGSNPQKIIQRGGAFLAGNLSFSRARVSLEGSTLVPVNKEPIFTIPGIPGIVQ
HEILNNRRHVLTKDTADSVKLWEITRGVVIEDYGKVKFEEKKEELFEMVRIPAWFTVDTR
LGSLSVHLDTPQCFSAEMYSADLNIVGKPEDDKVNLARETLKGLLAHWLGKRKQRSGSQA
SANGDVSSGKDITTRSITHSRIEVDSNTENDSMVYPPFEFSTTSPPSIITEGSQGGPWRK
KITDLDGTEDEKDFPWWCLDCVLNNRLPPRENTKCSFYLHPCEGSTVQILTQGKLSAPRI
LRIHKVVNYVVEKMVLDKPLDSANPDATFAPGLAGGHVQLSSVGDGSFRSGLKPWQKLKP
SIEILCNNQVLSPDMSLATVRAYIWKKSEDLVLNYRVIQGR
NT seq 2286 nt   +upstreamnt  +downstreamnt
atgcaccgagtgggtagttcagggaacacaaacaattccactcgccctcgtaaagagaag
agattaacatatgtgttgagtgatgccgatgacacgaagcattgtgccggcataaattct
ttgtctgtacttaagggatcagtgtctgggtgtgattacctgtttactggaagccgtgat
ggcacactaaaaagatggacgctggccgaaggtgctgctacgtgttcagcaacctttgag
tctcatgtggattgggttaatgatgctgttcttgtaggttataatacgcttgtttcttgt
tcttcagataccacccttaagacgtggaattgcatgtcagacggagcttgtaccaaaact
cttcgtcagcattctgactatgtcacatgccttgcttccgcagagaaaaatagcaatatt
gttgcctctggtggacttgggggggaggtatttgtatgggatcttgaagcagctcttact
ccagttgcaaagtcaggtgaatcaatggaagatgatagttcaaatgctgtcaatggttct
ggaaatgcaattacaagtttacgtactatcagctctagcaactgcatttccatgcactca
actcagccacatggatatgttccaatctctgccaaaggtcataaggaatcagtttatgca
ttggcaatgaatgatagtggatcgcttctggtctctggtggaacagagaaggttgttcgt
gtttgggatccaagaacaggttcaaagaaaatgaaactaagagggcatacagataatatc
agggctctgctgattgattctactggaagattttgcttatcaggatcttctgattcaatg
atcaggctatgggatcttggtcagcagcgctgtgtgcattcttatgctgtgcatacagat
tctgtttgggcacttgctagtaccccaacatttagtcatgtatatagtggtgggagagat
ctttctttatacttgacagacttggccacaagagagagtctcttgctttccacaggggag
catcccattctgcagttggctttacaagatgatagtatatgggttgcaacaacagattct
tcagttcatagatggcctgctgaagggagtaatccccagaagataattcaaagaggtggt
gcattcttggctggaaatttgtccttttcaagagcaagggtgtcattagaaggatcaacc
ctagtccctgttaataaagaacctatttttacgattcctggaattcccggaatagtgcaa
catgaaatattaaacaatagaaggcatgtcttgacaaaggacactgctgattcagtgaag
ttgtgggagattacgaggggtgttgtcattgaggattatggaaaggtcaaatttgaggag
aaaaaagaagagctttttgagatggtgaggattcctgcatggttcactgtggataccaga
cttggaagtttatccgtacatttagataccccacaatgcttttcggcagagatgtattca
gcagaccttaacattgtggggaaacctgaagatgacaaggttaatctagcacgagaaact
cttaaagggctcttggctcattggttgggtaaaagaaagcaaagatctggatcacaagca
tcagctaatggggatgtgtcatccggaaaggatattactactagaagtattacccattca
agaattgaggtggatagtaatactgaaaatgattcaatggtctatcctcccttcgaattt
tctacaacttcccctccttctattattactgagggctctcagggaggaccctggaggaag
aaaatcactgacttagatggtactgaagatgagaaggactttccctggtggtgtctcgat
tgcgtgttgaataatcgcctaccccctagagaaaataccaagtgcagtttttatctacat
ccatgtgaaggttcaactgtccagatcctcacacaagggaaactcagcgcccctcgtatt
ttacgaatccataaagtagttaattatgttgttgagaagatggtccttgacaaaccattg
gatagtgccaatcctgatgcaacatttgctcctggtcttgctggagggcacgtgcagctt
tcatcggtaggagatggatctttccgatctggattgaagccatggcaaaagcttaagcct
tctatagagatattgtgtaacaatcaggtcttgtccccagacatgagcttagccacggtg
cgggcttatatatggaagaaatctgaggatctggttctcaattacagagtgattcagggc
aggtga

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