Pyrus x bretschneideri (Chinese white pear): 103955142
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Entry
103955142 CDS
T03446
Name
(RefSeq) probable CCR4-associated factor 1 homolog 11
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103955142
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxb03019
]
103955142
Messenger RNA biogenesis [BR:
pxb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103955142
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
103955142
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Ntox33
Motif
Other DBs
NCBI-GeneID:
103955142
NCBI-ProteinID:
XP_009365291
LinkDB
All DBs
Position
Unknown
AA seq
272 aa
AA seq
DB search
MKSVAIRRVWQHNAAFEFHLITALIRHYTFVSLDTEFPGTVFQIPAQTPASKYHLMRENV
NATKIIQLGLTLSDPHGNLPDLGTDTCYIWEFNFRDFDIDRDCQNKDSIELLKRQGIDFL
ENKQNGISASYFSSLLRNSGLISRESNLTWVTFHSAYDFGFLIKILNEVLPHDITSFMWM
MDLYFGQRVYDIKYMIRFCQGLHGGLEKVANALNVDRVVGKSHQAGSDSLLTLQTFMKLK
DVYFKTSLLEQNCNSNFYCCQGVLYGLEIEDR
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcgtagcgattcgacgggtttggcagcacaacgcagcattcgagtttcatctg
attacagccttgattcgtcactacactttcgtctctctagacaccgaatttcctgggaca
gttttccaaattcctgcacagacgcctgcatccaaataccacctcatgagggaaaacgtg
aacgccaccaagataatccaattaggtctaacgctctccgacccccatggaaaccttccg
gacttgggcactgacacctgctacatttgggagttcaacttcagggactttgatatcgat
cgcgactgtcaaaacaaggactcaatcgagttacttaagaggcaaggaatcgatttcttg
gagaacaagcaaaatggtattagcgcttcctacttctcttctctgttgaggaattccggt
ctgatctccagggaatccaacttgacatgggtgacattccacagtgcttatgatttcggg
ttcttgatcaagattctaaacgaggtgttgccgcacgacattacgagtttcatgtggatg
atggatttgtactttggacaaagagtgtatgacatcaaatacatgattaggttttgccaa
gggcttcatggaggtctcgagaaagtggcgaatgcactcaatgtcgatcgtgtggtcgga
aagagtcaccaggctggctccgatagtctgctgactttgcaaacgtttatgaagctcaag
gatgtgtatttcaaaactagcttattggaacaaaactgcaactcaaacttttattgctgt
caaggagttttgtatggcttggaaattgaggatcgttga
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