Pyrus x bretschneideri (Chinese white pear): 103957716
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Entry
103957716 CDS
T03446
Name
(RefSeq) transcription initiation factor TFIID subunit 1-like
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103957716
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pxb01001
]
103957716
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pxb03021
]
103957716
03036 Chromosome and associated proteins [BR:
pxb03036
]
103957716
Enzymes [BR:
pxb01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
103957716
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
103957716
Protein kinases [BR:
pxb01001
]
Serine/threonine kinases: Other
TAF1 family
103957716
Transcription machinery [BR:
pxb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
103957716
Chromosome and associated proteins [BR:
pxb03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
103957716
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3591
Bromodomain
ubiquitin
TBP-binding
Rad60-SLD
zf-CCHC_6
Motif
Other DBs
NCBI-GeneID:
103957716
NCBI-ProteinID:
XP_009368185
LinkDB
All DBs
Position
Unknown
AA seq
1899 aa
AA seq
DB search
MGGDSYDGSQDGRDEDDEEEYEDVGRGSRFLGFMFGNVNDSGGLDADYLDEDAKEHLAAL
ADKLGPSLTGINLSVKSPQTSTDAVEEDYEEKAENAVNYFDIDEDFEGPEIQAATEEDHL
LPRKEYFSAQGSLATLEPTNSMFDDEDYDEEIEQEHEVVENNIDVQTISLPGVSTGEKYS
EDDCQIGGLDSENLAARAEEFQEVLTDKSATPLPVLCIEDGKVILRFSEIFGIHVPLKKA
EKRDHRYSVPKDRYKSMDVSEIVEEDEESFLKGSGQGFQSLKQADALKHDIFSALYDEDS
DFAKFRVLKGANSVDLLDDRAIKDSCLIAEPMKENQIVDISVESQSPLCSKFYPLDQQDW
EEGIVWGNSPIASDNSVESCEISGPDEASFNSETEPYSGTQNIQLEPKKEPDEKDHAVML
RSSCLLEPFGSRNSSEISSLPFSESRRHPQLLRLESRFEVDDHADGAMESVSKKLHQSDA
VRQFSKLTSQNRDMLEGSWLDQIIWDPDMPTGKSKLILDLQDEQMLFEILDNKESEHLRL
HSGAMIVTRPIKSSNGDSFEFPGHGGQSGWRYVSNDKHYSNRKTSQQLKSNSKKRTAQGI
KIYHSQPAMMLQTMKLRLSNKDVANFHRPKSLWYPHDNEVAVKERGKLPTQGPMKIIVKS
LGGKGSKLHVDAEETISSVKAKASKKLDFKPSETVKMFYLGKELEDDKSLTAQNVQPNSL
LHLVRTKIYLLPRAQKIPGENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNAG
MGARLCTYYQKSAPDDQTASLLRNDNNSLGHVISLNPADKSPFLGDTKAGCSQSSLETNM
YRAPVFSHKVPSTDYLLVRSAKGKLSIRRIDRLNVVGQQEPLMDVMSPGTKNLQNYMINR
LLVYICREFRAAEKRHLLPCIRADELPSQFPYLSEPFIRKKLKEHANFQRASNGQVMWVK
KRNFRILSEDELRNLVKPEEVCAYESMQAGLYRLKHLGITETHPSAISSAMSRLPDEAIT
LAAASHIERELQITPWNLSSNFVTCTQGKENIERLEISGVGDPSSRGLGFSYVRAAPKPS
MSSAVVKKKSAAGRGGSTVTGTDADLRRLSMEAAREVLLKFGVSDELIARQTRWHRIAMI
RKLSSEQAASGVKVDANTISKYARGQRMSFLQLQQQNREKCQEIWDRQVQSLSAIDGEEN
ESDSEGNNSDLDSFAGDLENLLDAEECEEGLGGDHESNHDKSDGVKGLKMRRRPSLAQAE
EEIEDEAAEAAELCRLLMDDDETERKKKKKTRVLGDEVGLAPGLRTSYILENADRGKKII
AAVQPDGFYTPKDNPVGDAKVVENLLKRNKIGKLKGMKKSDTTHMGLMNKKLKISGDGVK
STFKEKKSAREKFICGACGQLGHMRTNKHCPKYGYGEDQETQNDTPDLDKSSGKATALNS
SSQSQQKTTTKKLVPKSATKIAVVDASEAENLGPSTKVLPLKFKCGSTEKLPDKQPLGET
ESSERVTSDPENGKPTMKVHKIIISNKMKPENVPVESQKPPIVMRPLTDTDRGYVESQKQ
TIVIRPPANTDREQGESQKLSVAKRSSMEAKREQHHKKIIIKRPKEIIDIDQISQDGGTP
VEHRKTKRIVELTSSEKHRKQENVYLAKEAANKKARDERRLREEQEKRINEDRLREERAR
RLYEEEMRMIEERERLAELRKYEALLRQEREEEERQKAKNKLKKKRSEIRDDYLDDSRAR
RLDKRMPERDRGAKRRPVVELGRHGGESTPATKRRRGGEVGLANILERIVETLKDRIEVS
YLFLKPVSKKEAPDYLDIIERPMDLSTIKEKVRKMEYKSREQFRHDVWQITYNAHRYNDG
RNPGIPPLADQLLELCDYMLVENDESLTEAEAGIEYVDI
NT seq
5700 nt
NT seq
+upstream
nt +downstream
nt
atgggtggtgattcatatgatggttctcaagatggaagggatgaagatgatgaggaagaa
tacgaggacgttggtaggggtagtcgatttcttggatttatgtttggcaatgtcaatgac
tctggtgggcttgatgctgattaccttgatgaggatgcaaaagaacatcttgctgcactt
gctgacaagctgggtccatcgttaacaggcataaatctgtcagtaaaatcaccacaaaca
tcaactgatgctgttgaagaagattatgaagagaaggctgaaaatgcagttaattatttt
gatattgatgaggattttgagggaccagagattcaagctgctactgaggaggaccatttg
ttgccaagaaaggaatatttttctgctcaaggttcattggctactttggagcccacaaat
tctatgtttgatgatgaagattatgatgaagaaattgaacaggaacatgaggtggttgaa
aacaacatagatgttcaaactatctctttaccaggggtttctactggagaaaaatattct
gaggatgattgtcaaattgggggtctggactctgaaaatttggctgctcgtgcagaagag
tttcaggaagtgcttacagataaaagtgccacaccgctgccagttctatgcatagaagat
ggaaaggtgatactacggttctcagaaatctttggtattcatgtgcccttgaagaaggcg
gagaaaagagatcataggtactctgttcctaaagataggtacaaatccatggatgtttct
gagattgttgaagaggatgaagagtcattcttaaaaggatctggtcaaggatttcaatct
ttgaaacaggcagatgcactcaaacatgacattttttcagcactctatgatgaagactca
gacttcgcaaagtttcgtgttctaaaaggggcaaattcagtggatctgctggatgacagg
gcaataaaggactcttgtctcattgcggaaccaatgaaagagaatcaaatagtagatatt
tctgtggaaagtcaatcacctttgtgttcaaaattttatcctcttgatcaacaagactgg
gaagagggaattgtttggggaaattctcctatagcaagtgacaattctgttgagagttgt
gaaatttcgggacctgatgaagcttcatttaatagtgaaacagaaccttatagtgggaca
caaaatattcagttagagcccaaaaaagaacctgatgagaaggatcacgctgttatgctg
cgtagctcatgtctattggagccttttggctcaagaaactcatcagaaatttcatctctt
cctttctcggaaagcagacgccatccccaacttttaaggctagaatctagatttgaagtg
gatgaccatgctgatggtgcaatggagagtgtcagtaagaagcttcatcagagtgacgct
gtgaggcaatttagcaaactcacttcacagaacagagacatgctggaaggatcttggtta
gaccagataatatgggacccagatatgcctactgggaagtcaaagcttatccttgatctt
caagatgagcaaatgctttttgagattttggataacaaggaaagtgaacatctcaggctt
cattccggggccatgattgtgactcgcccaataaagtcaagtaatggggattcttttgag
tttccaggtcatggaggtcaatctgggtggcgatatgtttctaatgataaacactattca
aataggaaaacttctcagcaactgaaatcaaattctaaaaaacgcacagcgcagggcata
aagatttatcattcacaacctgcaatgatgttacagacaatgaaactgaggttaagcaac
aaggatgtagcaaattttcaccgaccaaaatctttatggtatcctcatgacaatgaagtg
gctgtaaaagagcgaggaaagctccccacgcaaggaccaatgaaaattattgttaaaagc
ttgggtggcaaaggaagtaagcttcatgtggatgctgaggaaacaatatcttctgttaaa
gcaaaagcttcaaagaagttagattttaagccatccgaaacagtgaagatgttctattta
gggaaggaacttgaagatgataaatctcttactgcccagaatgttcaaccaaattctttg
cttcatcttgttcgcacaaaaatatatttgttgccacgagcacaaaagattcctggtgaa
aataaatctttgcggcctcctggagcatttaagaagaaatctgatctttctgtgaaagat
ggtcatgtcttcctaatggagtactgtgaagaaagacctttacttttgagcaatgctggt
atgggtgcaagattatgtacttattaccaaaaatcagccccagatgatcaaactgcttct
ttgttacgcaatgataacaacagtttgggacatgtcatttcactaaatccagctgataaa
tcaccttttcttggagatacaaaagctggttgcagtcagtcatctcttgaaacaaatatg
tatagagcacctgtattttctcataaggtgccctcaactgattatttgttagttcgttct
gcaaaggggaagctttcaattagacgtattgaccgcctaaatgttgttgggcaacaggaa
ccactcatggatgtaatgtctccgggaactaagaatcttcaaaattatatgatcaatagg
cttcttgtctatatctgccgagagttccgtgctgccgaaaagcgccatttgcttccttgt
atccgcgcagatgagttaccttcacaatttccttatctatctgaaccctttattcggaag
aagctgaaggaacatgcaaatttccagagagcatcaaatggacaagttatgtgggttaag
aaacgcaacttccggattttgtcggaggatgaattaaggaatttggtgaaaccagaagag
gtgtgcgcctatgaaagcatgcaagctggtctttaccggctcaaacatttgggaattact
gaaacacatccgtctgccatatcttctgcaatgagtcgtctccctgatgaagcaattact
ctggctgctgcatcgcacattgaaagagaactgcagatcactccatggaacttgagtagc
aactttgtaacttgtacacagggaaaagaaaatattgagcgtttggaaatatctggtgtt
ggtgatccatctagccggggcctaggtttcagttatgttcgtgctgctccaaaaccatca
atgtcaagtgcagtcgtgaagaaaaaatctgctgctggtcgaggaggttccactgttact
ggaacagatgctgatctacgcagattaagcatggaggctgcacgagaggttcttcttaaa
tttggcgtttctgatgagctgattgcgaggcagactagatggcatcgtattgcgatgata
cgcaagctttcaagtgagcaagctgcatctggggttaaagttgatgcaaacactatcagt
aaatatgcacgtggccagcgtatgtccttccttcagctgcagcagcagaaccgggagaag
tgtcaagaaatttgggatcgtcaagtgcagagtctttcagctatagatggggaagaaaat
gagagtgactctgaaggaaataatagcgatctagattcctttgctggggatttagaaaat
ctgcttgatgcagaagaatgtgaagaagggctaggtggtgatcatgaatccaaccatgat
aaatcagatggtgttaaagggcttaaaatgagaaggcgcccttccttggctcaggcagaa
gaggaaattgaagatgaagcagctgaagcagctgagttatgcaggttgctcatggatgat
gatgaaactgagaggaaaaagaagaagaaaacaagagttttgggggatgaagttgggctg
gctcctggcttgcgaacaagttatatcttagaaaatgcagataggggaaaaaaaataatt
gctgctgtacaacctgatggattctatactccaaaagataatccagtcggagatgcgaaa
gtggtggaaaatcttcttaaaagaaacaagattggaaaactaaagggaatgaaaaagagt
gatactacacatatgggtctgatgaacaagaaactaaaaatatcaggagacggtgtcaag
agtacttttaaggagaagaaatcagcacgagagaaatttatctgtggagcctgtggtcag
cttggacacatgaggacaaacaagcattgccccaagtatggatacggagaagatcaggaa
acacagaatgatactccagacctggataaatcatctggaaaggcaactgctctgaattca
tctagtcagtctcaacagaaaactactacaaagaagctggtacctaaaagtgcaactaaa
attgctgtggttgatgcttcggaggctgaaaaccttggtccgagcacaaaggttcttcca
ttgaaattcaaatgtgggtcaactgaaaagcttcctgataaacagcctcttggagagaca
gagagttctgagcgggtcacatctgatcccgaaaatgggaagcccactatgaaggtgcac
aaaataataatttcgaacaagatgaaacctgaaaatgtacctgttgaatctcagaagccc
cctattgtgatgcgacctctgacagatacagataggggttatgttgaatcacagaagcaa
actattgttatacggccaccagcaaatactgatagagagcagggggaatctcaaaagctc
tcagttgctaaacggtcgtcaatggaggcaaagagagagcaacatcacaagaaaattata
attaaacgtccaaaagaaattattgatatagatcagatcagtcaggatgggggaactcct
gttgaacacaggaaaactaaaagaattgttgaattgacaagttctgaaaagcacaggaag
caggagaacgtgtatttggctaaggaagcagcaaacaagaaggctagagatgaaaggaga
ttacgagaggagcaagagaaacggataaatgaagacagattgagagaagagagggccagg
aggctttatgaagaggaaatgaggatgatagaggagcgagaacgactagcagagcttaga
aaatatgaagcattactcagacaagagagggaggaagaagaacgccagaaagcaaagaac
aaattgaagaagaaaaggtctgagataagagatgattatttagatgactcacgagcacga
agattagacaaaaggatgccagaaagagatcggggtgcaaaaaggaggccagttgttgaa
ttgggaaggcatggtggagaatctaccccagcaacaaagcgccgtagagggggcgaggtc
ggtctggcaaacatcttagagcgtattgtagaaaccctcaaagatcgaattgaagtatca
tatctttttctgaaacctgtatccaaaaaggaagctcctgattacttggacatcatagag
cgccccatggatctgtctacaatcaaggagaaggtgaggaaaatggagtacaagagcagg
gagcaattcaggcacgacgtgtggcagattacttataatgcccacagatataacgatgga
cgcaacccaggcatacctccccttgcagatcagctcttagagctttgtgactatatgttg
gttgagaacgacgaaagcttgactgaagctgaagcgggcattgaatatgtagatatctag
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integrated database retrieval system
