Pyrus x bretschneideri (Chinese white pear): 103958056
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Entry
103958056 CDS
T03446
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb00040
Pentose and glucuronate interconversions
pxb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103958056
Enzymes [BR:
pxb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
103958056
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
103958056
NCBI-ProteinID:
XP_009368550
LinkDB
All DBs
Position
Unknown
AA seq
382 aa
AA seq
DB search
MGNSHGHHRKRRNGPGSSETANSGFKYGSPDQAAQIPSSSSTSAKKTSSSMVVALPYALV
DSSLRALSAQAEGFGRLAIGGLHGAVYHVTTLADDGPGSLREGCRQKEPLWIVFEISGTI
HLQSYLNVSSYKTIDGRGQRIKLTGKGLRLKECEHVIVCNLEFEGGRGPDVDGIQIKPNS
KHIWIDRCSLRDYEDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHIDDRCIRVTIH
HCFFDGTRQRHPRVRFAKVHLYNNYTRNWGIYAVCASVESQIFSECNIYEAGQKKVAFKY
LTEKAADKETAMTGHIKSEGDLFVTGTQAGLSPDGGEHCVFHPTQHYQTWTKGPPVDDLK
HVLQHCTGWQCVPRPADQGLAK
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgggcaactcccacggccaccaccgtaaacgccgtaacggccccgggtccagtgaaacg
gccaattcgggctttaaatatggttcgccggatcaagcagctcaaatccctagctctagc
tcaacgtcagctaagaagaccagcagcagcatggtggttgccttgccgtacgctctcgtc
gactcgagcttgcgcgccctctccgcccaggccgagggcttcggccggctggcaatcggc
ggcctccacggcgccgtttaccacgtcaccactctagcagatgatggtccgggttcactt
agagaaggatgtcgtcagaaagaaccgctttggattgtctttgaaatttcaggcactatc
catctccaatcttacttgaacgtgtcatcgtataagactatagatgggcgcggtcagagg
attaaacttacagggaaagggttgaggttgaaggaatgtgaacatgtcattgtatgcaat
ttagagtttgaaggtggtagagggccagatgttgatggcattcaaataaaacccaattct
aaacacatatggatagatcgctgcagccttcgtgattatgaagacggacttatcgatatc
accagaggaagcactgatattacaatttccaggtgtcatttttcacagcatgataaaaca
atgctgattggcgcagatccctctcatattgatgacagatgcatccgggttaccattcac
cactgtttctttgatggaaccagacagaggcatcctcgtgttagatttgcgaaagtacat
ctatataacaactacacccgaaactggggcatatatgctgtttgtgctagtgtagaatct
cagatattctcggaatgcaatatatatgaagcaggacagaaaaaagtggcatttaagtac
cttacggagaaggcagcggacaaggagacggcaatgactggccacattaagtccgaaggc
gacttatttgtaacgggaactcaagcaggattatcccccgatggtggtgaacattgcgtg
tttcatcctacccagcactatcagacatggacaaaaggaccgcccgtggacgatcttaag
catgttctccaacattgcacaggatggcagtgtgttccgcggccagctgatcaaggatta
gcgaagtag
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