Pyrus x bretschneideri (Chinese white pear): 103958471
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Entry
103958471 CDS
T03446
Name
(RefSeq) probable pectate lyase 13
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb00040
Pentose and glucuronate interconversions
pxb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103958471
Enzymes [BR:
pxb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
103958471
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
103958471
NCBI-ProteinID:
XP_009369007
LinkDB
All DBs
Position
Unknown
AA seq
460 aa
AA seq
DB search
MLLLTSCILLICFFLSPLSRASYSFNLSLPHEHPDPDAVAHEVQRSVNASVSRRQLSIDV
KDQSQCLVGNPIDDCWRCEDWSNNRQKLADCGIGFGMDAMGGKGGLIYIVTDSSDSNPAN
PTPGTLRHAVIQTEPLWIIFSADMTIKLKCELIVNSFKTIDGRGYSVHAPTHVGWRGESD
GDGISLFGAHKIWIDHCSLSFCADGLIDAIMGSTGITISNNYFAHHDEVMLLGHNDKYLP
DSGMQVTIAFNHFGVALVQRMPRCRRGYIHVVNNDFTRWEMYAIGGSANPTINSQGNRYT
APQDPNAKEVTKRVDTNEGDWSDWNWRTEGDVMVNGAFFVPSGAGMSAQYAKASSIEPKS
VTFIEQITANAGVFGDPREESSRVTSPDDGTITDGGSTGSGSGGSNGHGNDDDYFGMIFG
NGAQPSPNTIFLSLSIIFILYFTTKHGGALLSLPLLLTLL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgcttcttcttaccagctgcattctcttaatttgtttctttctctctcctctctctaga
gcttcttactccttcaacctctccctccctcacgagcacccagaccctgatgcagttgct
catgaagttcaaaggagtgtcaatgcgtctgtttccaggcgccagctgtccattgacgtc
aaggaccaaagccagtgccttgtcggcaacccaatcgacgattgctggcgctgcgaggac
tggagcaacaaccgccaaaagctcgccgattgcggcatcgggttcggcatggacgccatg
ggaggtaaagggggcctgatctacatagtcaccgactcgtcggattccaacccggccaac
ccaactccgggcacgctccgccacgccgtcatccaaaccgagcccctctggatcatcttc
tccgctgacatgaccatcaagctcaaatgcgagctcatcgtcaacagcttcaagaccatc
gacggccgcggctacagcgtccacgcccccacccacgtcggctggcgtggcgagtcggac
ggcgacggcatctccctcttcggcgctcacaaaatctggatcgaccactgctccctctcg
ttctgcgctgacggattaatcgacgccatcatggggtcgaccggaatcacgatttccaac
aactacttcgcccaccatgacgaggtgatgctgttgggccacaacgacaagtacttgccg
gactccgggatgcaggtgacgatagcgtttaaccacttcggtgtagcgctggtgcagcgt
atgccgcggtgcagacgcgggtacatccacgtggtgaacaacgacttcacgcggtgggag
atgtatgctatcggcggtagcgctaaccccaccatcaacagccaggggaaccggtacact
gctcctcaggacccgaacgccaaggaggtgacaaagcgtgtggacacgaacgagggggat
tggtccgactggaactggaggacggagggggacgtgatggtaaatggtgcgtttttcgta
ccatccggcgcgggaatgagcgctcagtacgccaaggcctcaagcatcgagcccaagtcc
gtgactttcattgaacaaatcacggccaacgccggtgtctttggtgacccaagggaggag
agcagtcgcgtaacgagccccgatgatgggaccatcaccgatggcggcagcaccggcagt
ggcagtggaggatccaacggccacggcaatgacgatgactattttggaatgatatttggg
aacggtgctcaaccaagcccaaacacaatattcttgtctctttcaattatttttattttg
tactttaccaccaaacatggtggtgctctattatcattaccattattattaacattatta
tag
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